Thalassospira marina: CSC3H3_20015
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Entry
CSC3H3_20015 CDS
T05224
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
thac
Thalassospira marina
Brite
KEGG Orthology (KO) [BR:
thac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
thac03016
]
CSC3H3_20015
Enzymes [BR:
thac01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
CSC3H3_20015
Transfer RNA biogenesis [BR:
thac03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CSC3H3_20015
Prokaryotic type
CSC3H3_20015
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB_C
Motif
Other DBs
NCBI-ProteinID:
AUG54749
UniProt:
A0A2N3KW05
LinkDB
All DBs
Position
4403140..4404066
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AA seq
308 aa
AA seq
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MARRRRGKIISGWLAVDKPLEITSSTVVNQVRRLLDAAKAGHGGTLDPLATGVLPIAFGE
ATKTVAYVMDGSKSYRVTLKFGESRSTDDAEGEVTATSDHRPTREEIEAVLGEFIGEIQQ
VPPKFSAIKVNGKRAYDLARRDEDVVLKARPILIKDLRLVDMPDRDHAVFDVISGKGAYM
RSLARDIALRLGTVGHIAALRRTSAGPFAEGDSIPLQELLEMDPEAVMEKLLPVETALDD
IPALALTEVEAQRLASGQPVGLLPVVKRSELGTSVAQDGIVCAMLNDRAVALAEIHGGEI
RPVRVFNL
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgtcggcgtcgcggcaaaattatcagcggctggctggcggtcgacaaacccctt
gagatcacgtcttcaaccgtggtcaaccaggtgcgtcgtctgcttgatgcggccaaagcc
gggcacggcgggactcttgacccgttggcaaccggcgttttgcccattgcctttggcgag
gcgacaaaaaccgtcgcctatgtcatggatggcagtaaaagttaccgcgttaccctgaaa
ttcggggaatcgcgcagcaccgatgatgccgaaggcgaagtgaccgccacatcggaccat
cgcccgactcgcgaagagatcgaggccgtgctgggtgaattcatcggcgaaattcagcag
gtgccgcccaaattttcggcgatcaaggtaaatggcaagcgtgcctatgatcttgcgcgc
cgtgatgaagacgtggttttgaaagcccgtccgattttgataaaagatcttcgtctggtt
gacatgcctgatcgcgatcatgccgtgttcgatgtaatatcgggcaaaggggcatatatg
cggtcgctggcgcgcgatatcgcattgcgccttggcactgttggccacattgccgccctt
cgccgcacatcggcggggccgtttgcggaaggtgattccattcccctgcaggaactgctg
gaaatggatcccgaggcggtaatggaaaaactgcttccggtcgagaccgcgctggacgac
atcccggcgctggccctgaccgaagtcgaggcgcaacgtcttgccagcgggcagcctgtc
gggctgttaccggtggtcaaacgcagcgaactcggtacctccgtcgcccaggacgggatc
gtctgtgccatgctgaacgaccgcgctgttgcgctggccgaaattcatggcggcgaaatc
cgtccggtgcgtgtatttaatctttaa
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