KEGG   Thalassospira marina: CSC3H3_21540
Entry
CSC3H3_21540      CDS       T05224                                 
Symbol
icmF
Name
(GenBank) type VI secretion system membrane subunit TssM
  KO
K11891  type VI secretion system protein ImpL
Organism
thac  Thalassospira marina
Pathway
thac03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:thac00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    CSC3H3_21540 (icmF)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:thac02044]
    CSC3H3_21540 (icmF)
Secretion system [BR:thac02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   CSC3H3_21540 (icmF)
SSDB
Motif
Pfam: IcmF-related IcmF-related_N IcmF_C IcmF_helical nSTAND1
Other DBs
NCBI-ProteinID: AUG55448
UniProt: A0ABN5FMA8
LinkDB
Position
pCSC3H3:281982..285611
AA seq 1209 aa
MVRRLFNILKKLLRPLVLVAVFSLIMAPVIYFFGERIGTHGVYPFKDEGIRFVVSAGLLI
LSICLFLFMAIRAVVRWWLARRNASSRQPSEEEMEKTAMAAVFDRAMTVIRNRWSGEGRG
VYSLPWYLVLGQSGSGKTSLIENGDLRFPIDHEIELDLRELPPRQANHFFSWRVAGNEAV
LLDLNGDYFRPQQRRSSVENALWDAFLSNLQRVRPRRPINGIVLAIDLSEFMGMSFNQRE
NYALEIRRIINDAVDRLGTRMTIHLAFTKLDQVAGFADYFATLSAADREMLYGFHFLYEG
RHTPEWLDQFDKQYSEYLDRLHLRLKKRVLELKSANSRQEAFSFYRTFLGLEAPLRSFLE
GALSPDKFTTPPLVRGLYFFSNRQENAPRNVFLEAVGQRYALPAPLYGTSQNTSYPYFVT
SFLKKVVFPEAGLAGNNFRVEERYRKRILMSFGIGAAACIVGAFYWNDRYQINMERAQDV
LAKTEAFSKAAARASLDPTGKQYLQPLNELRAAIDEFGDYRDVGPVQAQLTLYQGRDIGP
IIDRAYNYELHREFAPALVAGLARNLRSVCPKGGDKELDYLRVYRMMAEMDGRDNAIVDG
YFNQLWDTRLKREPQIREQLAAHLDYMLDRNPQAYEVDANLVAQAQRDLSQQTPFRRVYR
TIRSRTTQQLSKPLELPIAAGAPFNVVYQPVDLEQDQAAVETEGNGLAAARDCSVQSVSD
PDQGPFEIPRFFTKKQYHAMFVPQLEQVAKVAGDDLWVLGKLETSTITEADYDDIRNRVR
ESYVNDYIGSWKHGLNSMQVRPFVDIKQATEILHTLADGNNPIRRVAELVRDNSVLYEPK
EAASGEDGENLADQVDFDTPEDPNRVAARDIKREFADIREMLADRPDGGPSNMDEIEDAL
GSVYQYMKAVRDASDPNTRSLELAIERAKLAGDDPIFVLERVAERTPAPFGEHLQSVANQ
SWGVIMRGASVALGRKWHDQVYGAYQRLIAGKYPFNRKSGNDLPLKDFEEFFRPGGILDA
FYKQELLTFVDENSGKPKVIDGQSITVDRNFTTQLRAAMNITKSFFNQTGDLSVEFSVAP
AGMNANISRAVLNFEGQLVVSSHGPSRPITVFWPNIIDGPASSRVDMSALSGSGRSMAKQ
FDGPWSFLHLYDAAKKSNLGNNSVDITFANANGQTATFRVRPEARVNAFFNSPLSGFSLP
RNLHGGLSS
NT seq 3630 nt   +upstreamnt  +downstreamnt
atggttaggcgattattcaatattctcaaaaaactgctgcgtccgctggtactggttgca
gtgttcagcctgattatggcgccggtcatttatttcttcggcgagcgtatcggcacccat
ggcgtttatcccttcaaggatgaaggcatccggtttgtggtatcggccgggttgcttatt
ctgtccatttgcctgtttctttttatggccattcgtgcggttgtgcgctggtggctggca
cgtcgcaatgccagctcgcgccagccgtccgaggaagaaatggaaaaaaccgccatggcg
gcggtctttgaccgggcgatgacggtgatccgcaatcgctggtcaggcgaggggcgtggg
gtttacagcctgccctggtatctggtgctgggccagtcaggcagcggcaaaaccagcctg
atcgaaaatggcgatttgcgctttccgattgaccatgaaatcgaacttgatttgcgcgaa
ttgccgccgcgtcaggccaaccatttcttttcctggcgcgttgccggtaacgaggctgtg
ctgctggatttgaatggcgattatttccgcccgcaacagcgccgctcatcggttgaaaat
gccctgtgggatgcgtttttaagcaacttgcaacgggtgcgtccgcgccgcccgatcaat
ggtatcgtgctggcaattgatttgtccgaatttatgggcatgtcctttaaccagcgcgaa
aactatgccttggaaatccgtcgtatcatcaatgatgctgtggaccgccttggcacccgc
atgaccattcatcttgctttcaccaagctcgaccaggttgcaggctttgccgattatttc
gcaacgcttagcgctgctgatcgcgaaatgctgtatggcttccatttcctttatgaaggc
cgccataccccggaatggctggatcagttcgacaaacaatacagcgaatatctggatcgt
ttgcatctgcgcctgaaaaaacgggtgctggaacttaaatccgccaatagccgtcaggaa
gccttttcgttctatcgaaccttcctgggtctggaagcacctttgcggtccttccttgag
ggggcattatcgcccgataaatttacaacgccgccgctggtgcggggattgtatttcttc
agtaaccgtcaggaaaatgcaccgcgcaacgtgttcctcgaagccgttggccagcgttac
gccctgccagccccgctttatggcaccagccagaacacgtcctatccttattttgtgacg
tcgttccttaaaaaggtggtcttccccgaagcaggccttgccggtaacaatttccgtgta
gaggaacgctatcgcaaacgtattcttatgtcgtttggtattggcgcggcagcctgcatt
gttggcgcgttttattggaatgaccgctaccagatcaatatggaacgcgcgcaggatgtg
ttggcaaagactgaagcattcagcaaggctgctgcccgcgccagccttgatccgaccggc
aagcaatatttgcagccgttaaatgaactgcgcgccgccattgacgaatttggtgattac
cgcgatgtcgggccggtgcaggcacaattgaccctgtatcagggccgcgatattggcccg
atcattgaccgcgcctataattacgaactgcaccgcgaatttgcaccggctctggtggcc
gggctggcccgtaaccttcgttctgtctgccccaagggtggggacaaggaactcgattat
ctgcgggtctatcgcatgatggccgagatggacgggcgtgataacgccattgtcgatggc
tatttcaaccagctttgggatacgcgcctgaaacgcgaaccgcaaatccgcgaacagctg
gccgcccacctggattacatgctggaccgcaatccccaggcttacgaggttgatgccaac
ctggtcgcccaggcgcagcgtgaccttagccaacaaacaccgttccgccgtgtttatcgc
acgatacgatcgcgcacgacacaacagctttccaaaccgctggaactgccgattgcggcc
ggggcaccttttaacgttgtttatcagccggttgaccttgaacaggaccaagcggccgtt
gaaaccgaaggcaatggcctggccgcagcacgcgattgcagcgtacaaagtgtcagcgac
ccggatcagggaccgtttgaaattccgcggtttttcaccaaaaagcagtatcacgccatg
ttcgtgccgcagcttgaacaggtggcaaaggttgccggtgatgatttgtgggttctgggc
aagcttgaaaccagcaccatcaccgaggccgattacgatgacattcgcaaccgtgtccgc
gaaagctatgtgaatgattatatcggttcatggaaacacggcctgaattcgatgcaggtt
cgcccgtttgtcgatatcaaacaggccaccgaaatccttcatacgctggccgatggcaat
aacccgatccgccgggttgccgaactggtgcgtgataattcggttctgtatgaacccaaa
gaagccgccagcggtgaagatggcgaaaaccttgccgatcaggttgattttgatacgccc
gaagatcctaaccgggttgccgcacgcgatatcaaacgcgagttcgccgatatccgcgaa
atgctggccgatcgccccgatggcggcccgtccaacatggatgaaatcgaagacgcgctg
gggtctgtctaccagtatatgaaggccgtacgcgatgcatccgaccccaatacaagatcg
cttgaactggccattgaacgggccaagcttgccggtgatgaccccatctttgtccttgaa
cgggtggcggaacggacacctgcgccctttggcgaacatttgcagtcggttgccaatcag
tcctggggtgtgatcatgcgtggggcgtcggttgcgctgggtcgcaaatggcacgatcag
gtttatggggcctatcagcggcttatcgcgggcaagtatccgtttaaccgtaaatccggc
aatgatttgcccctgaaagattttgaagaatttttccgtcccggtggcatccttgatgcg
ttctacaaacaggaattgcttacctttgtagatgaaaacagcggaaaaccaaaagtgatt
gatggtcagtccattacggtcgatcgcaactttacgacccagttgcgtgccgcaatgaac
atcaccaaaagcttctttaaccagacaggtgatctgtcggttgaattcagcgtcgccccg
gctggcatgaatgccaatatcagccgtgcggttctgaatttcgagggccagcttgttgtc
agcagccacggccccagccggccgatcacggttttctggcccaacattatcgatggtccg
gcatcgtcccgtgttgatatgtcagcactttcgggttcggggcggtcaatggccaaacag
ttcgatgggccctggtcgttcctgcatctttatgacgcggccaaaaaatcgaacctcggt
aataattcagttgacatcacctttgccaatgccaacggccagactgcgacattccgtgtt
cgcccggaagcccgtgtgaatgcgtttttcaacagtccgctcagcggcttctcattgccc
agaaatctccatgggggactatcttcatga

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