KEGG   Thalassospira sp. B30-1: IT971_00240
Entry
IT971_00240       CDS       T11046                                 
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
  KO
K10126  two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD
Organism
thad  Thalassospira sp. B30-1
Pathway
thad02020  Two-component system
Brite
KEGG Orthology (KO) [BR:thad00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    IT971_00240
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:thad02022]
    IT971_00240
Two-component system [BR:thad02022]
 NtrC family
  DctB-DctD (C4-dicarboxylate transport)
   IT971_00240
SSDB
Motif
Pfam: Sigma54_activat Response_reg Sigma54_activ_2 AAA_lid_14 HTH_8 AAA_5 Mg_chelatase AAA AAA_16 AAA_2 AAA_19 MCM AAA_22 T2SSE wHTH_Par
Other DBs
NCBI-ProteinID: QPL35820
LinkDB
Position
complement(53966..55381)
AA seq 471 aa
MPHSKIDTTSAKPQTAQVIIVDDEEALRVSLSQWLDLSGYTICVHADAISALEDITPDFA
GVILTDVKMPKLDGIAFTKSVLAIDRDIPVILMTGHGDVPMAVEAMKSGAYDFVEKPFEP
NDILESLERAIEKRKLVIENRALRTQIAQQGTLDSRLIGNSPSMRALKAEIANIAPTEVP
VLVSGETGTGKELVARAIHDLSTRNDRRFVAVNCAAIPESTAESELFGHEKGAFTGATNR
RIGWIEHADNGTLFLDELSSMPLALQAKLLRVIEQREIVRLGSNTPVKVNFRLICATNED
LPTAVADKRFREDLLFRINTFELQIAPLRQRKDDLPLLFDIFAERAAENFDRPYEKPPAK
LWGGLLAHEWSGNVRELKNLAERYVLLTGNAEERWARLFGNSIGNGAADPADKTGSLADQ
LRHFEQHIIRDALTRHNGNVKTVMDELDIPRRTLNEKMKKLNIRRDTIEER
NT seq 1416 nt   +upstreamnt  +downstreamnt
atgccgcactcgaaaatcgataccaccagcgcaaaaccacaaacggcacaggtgatcatc
gtcgatgatgaagaagccctgcgtgtttccctgtcgcaatggcttgacctgtcaggctac
accatctgtgttcatgccgacgcgatttcagcccttgaagatatcacacccgatttcgcc
ggcgtcatcctgaccgatgtcaaaatgccaaagcttgatggcatcgcctttaccaaatcg
gttctggcgatcgaccgtgacattccggtgatcctgatgaccggtcatggcgatgtcccg
atggcggtcgaagcgatgaaaagcggggcctatgatttcgttgaaaaaccgtttgagccg
aacgacatcctcgaaagccttgagcgcgcaattgaaaaacgcaagcttgtcatcgaaaac
cgcgccctgcgcacgcaaatcgcccaacagggcacgcttgacagccgcctgatcggcaac
agcccgtcgatgcgtgccctcaaggccgaaatcgccaatatcgccccgaccgaagtcccg
gttctggtttccggagaaaccggtaccggcaaggaactggtcgcgcgtgccattcatgac
ctcagcacccggaatgatcggcgatttgttgccgttaactgcgcggcaattccagaaagt
accgccgaaagcgagcttttcggtcatgaaaaaggggcctttaccggcgcaaccaaccgc
cggatcggctggatcgaacatgccgataatggcaccctgtttcttgatgaattatcaagc
atgccgctggccttgcaggccaagcttctgcgcgtcattgaacagcgcgaaatcgtccga
cttgggtcaaacaccccggtaaaagtcaatttccggctgatctgtgccaccaacgaagat
ttgccgaccgccgttgctgataagcgtttccgcgaagaccttctgtttcggatcaacaca
ttcgaactgcaaatcgccccgcttcgccagcgcaaggatgacctgccgctgctgtttgac
atttttgccgaacgggcggccgaaaattttgatcgcccgtatgaaaaaccgcctgcaaaa
ctttggggcggacttctggctcatgaatggtcgggaaatgtgcgcgaacttaaaaacctc
gcggaacgctatgtgctcctgaccggcaacgccgaagaacgctgggcacgtctgtttggc
aacagcattggcaatggtgccgccgaccctgccgacaaaaccggatcactcgcagatcag
cttcgccatttcgaacagcacatcatccgcgatgctctgacgcgccataacggcaacgtc
aaaacagtaatggacgaactcgacattccgcgtcgcaccctgaacgaaaaaatgaaaaag
ctgaacattcgccgtgataccattgaagagcgataa

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