Thalassospira sp. B30-1: IT971_01735
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Entry
IT971_01735 CDS
T11046
Symbol
smc
Name
(GenBank) chromosome segregation protein SMC
KO
K03529
chromosome segregation protein
Organism
thad Thalassospira sp. B30-1
Brite
KEGG Orthology (KO) [BR:
thad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
thad03036
]
IT971_01735 (smc)
Chromosome and associated proteins [BR:
thad03036
]
Prokaryotic type
Chromosome partitioning proteins
Condensin-like complex
IT971_01735 (smc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_21
AAA_15
DUF7310
SMC_hinge
AAA_29
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
QPL36080
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Position
371361..374894
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AA seq
1177 aa
AA seq
DB search
MVQFKSLRLTGFKSFVDSTELLVEDGLTGVVGPNGCGKSNLVEALRWVMGETSAKQMRGS
DMSDVIFGGTSSRPARNVAEVTVVLDNAERKAPAMFNDHETLEVVRRIERSGGSNYRVNG
KDVRARDVQLLFADAATGARSNAMVSQGKIGALIGAKPSQRRLVLEEAAGITGLHSRRHE
AELRLKNAEQNMERLEDVLVTLDSQIASLQKQARQAERYRKLSESIRQTEALLFHIRWTD
AEKRQADARELLVLGESAVRDLTGQVTEATTIQAHIAASLPDLRKKESDAAAALQRMLIE
REGLDKDKSQIETQMSQLRARIQQIDADLAREAELASDAEGALNKLKAEREELGQAQDGE
DDELDEAKERAVAQAARVETLEGQVDELTNRAAAEEARLKSVQQRLGELSARRSRLTERY
DEAVARLDDIRVEADFTDALEEAGLALEECEELCEQRKLAIEDAEMRLAELRDREDSLKT
AETESRDALRDVESRKARLVAEIEALESLVKGNADQQFPAVIEKLSVTSGLEMAMAAALG
EDLDAPDAEDAPMHWSAVDPDADDPDLPEGVQALAKFVDGPALLNRRLWQIGVVDDEATG
NWLAKTLKTGQRLVSREGALWRWDGYRIKVGAELPAAARLRQRNRLEELRLELEEIDDAV
ELAAEKADTTRENVERLEEDVEAARNGEQEAHRALREAEGSLARAREEIANIKRDASAIE
GRLQNAEEAEKRAKQDLDELIAEQEELAATPEESSEGLMEIKAELIEKRAELSDARADQM
EARSQLERMQRDASGRRKRLEFVESEIASWNDRASGAGERVAQLRERQEEARMEIEELEL
KPDEIEERRAILSDRIEIADQARKDAADELVRAENAQREADHNLKEAEQKLAEAREGRVR
CEALLEQAEQHRRDLIERIRERVNATPDQLVELAEIDQTKELPSEDDIEARLQRQSRERE
NLGAVNLRAEVELAEMEEQKDTLVSERDDLIAAIDKLRNGINQLNREARNRLKAAFDEVD
KHFQQLFVRLFGGGGAHLMLTDADDPLEAGLEIMASPPGKKLQHLSLLSGGEQALTAVAL
LFAVFLTNPAPICVLDEVDAPLDDANVDRFCKLLEAIGRHANTRFLVITHHRMTMARMNR
LFGVTMAERGVSSLVSVDLRQAEVYSQKEQKELDFTN
NT seq
3534 nt
NT seq
+upstream
nt +downstream
nt
ttggtccagtttaaatcgctacggctgacggggttcaaatccttcgtcgattcaaccgaa
ttgctggttgaagacgggttgacaggtgttgtcggcccgaatggctgtggcaaatccaat
cttgtcgaagccctgcgctgggtcatgggtgaaacctctgccaagcagatgcgcggctcg
gacatgtccgacgttatttttggcgggacatcgtcgcgtcctgcgcggaacgtggccgaa
gttaccgtcgttctggataatgccgaacgcaaagcaccggcgatgttcaacgatcacgaa
acgcttgaggtcgtgcgacgtatcgaacgcagcggcgggtcgaattatcgggtcaatggc
aaggatgtccgtgcgcgtgacgtccaattgctgtttgccgatgccgcgaccggggcacgg
tcaaacgcgatggtgtcacagggcaagatcggtgcgctgatcggagcgaagccaagtcag
cgcagactggttctggaggaagccgccggtattaccggcctgcattcacgccgtcacgag
gccgagcttcgacttaaaaatgccgaacagaatatggaacgccttgaagacgttctggtc
acactcgatagccagatcgcgtctctgcaaaagcaggcgcgacaggccgaacggtatcgc
aaactttccgaaagcatccgccagacggaggctctgctattccacatccgctggaccgat
gccgaaaaacggcaagcagatgcccgtgaattgctggtgctgggcgaaagtgccgtgcgt
gacctgaccggtcaggtgaccgaggcaacgaccattcaggcccatattgcggcaagcctt
ccggatcttcgcaaaaaggaaagcgatgcggcagcggccttgcagcgcatgctgatcgag
cgtgagggactggacaaggacaagtcacagatcgaaacccaaatgtcgcagcttcgtgcg
cgcatccagcagattgatgccgaccttgcgcgtgaagccgaactggcaagcgacgccgaa
ggggcgttgaacaagcttaaggcagaacgcgaagagctgggtcaagcccaggacggcgag
gatgacgagcttgacgaggcaaaggaacgcgccgtcgcgcaggccgcaagggttgaaacg
ctggaagggcaggttgacgaactgaccaaccgggcagccgccgaagaagcccggcttaaa
agcgttcagcagcggttaggcgagctttccgcccgccggtcacgtttgaccgaacgctat
gacgaggccgttgcccgccttgatgatatccgggttgaagccgattttaccgacgccctc
gaagaggccggtctggcgcttgaggaatgcgaagaactttgcgagcagcgcaagcttgcc
atcgaagatgccgaaatgcgtcttgccgaattgcgcgaccgtgaagacagcctgaaaacg
gcggaaaccgaatcgcgcgatgccctgcgtgatgtcgaaagccgcaaggcacggcttgtc
gccgagatcgaggcgcttgaaagtctggtcaagggcaatgcagatcagcagttcccggcg
gtgatcgaaaagctttcggtgaccagcggccttgaaatggcgatggcggcggcacttggc
gaggaccttgacgcgcccgatgccgaagatgccccgatgcactggtcggcggttgacccc
gacgcagatgaccctgacctgcccgaaggggtccaggcactggcgaaatttgttgacggt
ccggcattgctgaaccgacgcctttggcagatcggggttgttgatgacgaggcaaccggt
aactggctggccaagacgttgaaaaccgggcagcggttggtgtcgcgtgaaggtgcgctt
tggcgttgggacgggtatcggatcaaggttggcgcggagcttccggcagccgcacgtttg
cgacagcgtaatcgacttgaagaattacgccttgagctcgaggagatcgacgacgcggtc
gagcttgcagcggaaaaggccgatacaacgcgggaaaatgttgaacgtcttgaagaagat
gttgaagccgcacgcaacggcgaacaggaagcccaccgtgcccttcgcgaggcagaggga
tcattggcccgcgcgcgagaagaaattgccaatatcaaacgtgacgccagtgccattgaa
ggacgcctgcaaaacgcagaagaagcagaaaagcgtgccaagcaggaccttgatgaactg
atcgccgagcaggaagaactggcggcaacgcccgaggaatcgagcgaaggcctgatggaa
atcaaggctgagctgattgaaaaacgtgccgagctttcggatgcgcgcgccgatcagatg
gaagcgcgcagccagcttgaacgcatgcagcgtgatgcatcggggcgtcgcaagcgactt
gaatttgttgaaagcgaaatcgcatcctggaatgatcgcgcatcgggggcaggcgaacgt
gtggcccagcttcgtgaacgtcaggaagaagcgcgcatggagatcgaggagcttgaactt
aagcccgacgagatcgaagagcgccgcgcgatcctttccgaccgtatcgagattgccgat
caggcacgcaaggacgcggcggatgaactggtgcgtgccgaaaatgcgcagcgcgaagca
gatcacaacctgaaagaagcggaacagaaactggccgaggcccgcgaaggccgggttagg
tgtgaagcccttctggagcaggcagaacagcaccgccgagatttgattgaacgcattcgc
gaacgggttaatgccacgcctgatcagcttgtagagctggccgaaatcgatcagaccaag
gaattgccatccgaagacgatatcgaggcccgtttgcagcgtcagtcgcgcgaacgcgaa
aaccttggtgcggttaacctgagggccgaggtcgaactggccgagatggaagaacagaaa
gacacactggtttccgaacgcgatgacctgatcgccgccattgataaattacgcaatggt
atcaaccagctgaaccgcgaagcacgcaaccgcctgaaagcggcatttgacgaagtcgac
aaacatttccagcagttgtttgtccgcctgtttggcggtggcggggcgcatctgatgctg
accgatgcggacgatccgctggaagccgggcttgagatcatggcatccccgccgggcaag
aaattgcagcacctttcattgctgtctggtggcgagcaggcattgaccgctgttgcgctt
ctgtttgcggtgttcctgaccaacccggcaccgatttgcgtgctcgacgaagttgacgca
ccacttgatgacgccaacgtcgaccggttctgtaaattgcttgaagcgattggtcgtcac
gccaatacgcgtttccttgtgattacccaccatcgcatgaccatggcccgcatgaaccgc
ctgttcggggtgacgatggcggaacgtggtgtttcctcgctggtgtcggtcgatttgcgc
caggccgaggtctattcccagaaagagcaaaaagagctcgattttaccaattga
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