Thalassospira sp. B30-1: IT971_02600
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Entry
IT971_02600 CDS
T11046
Name
(GenBank) ATP-binding cassette domain-containing protein
KO
K12541
ATP-binding cassette, subfamily C, bacterial LapB
Organism
thad Thalassospira sp. B30-1
Pathway
thad02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
thad00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
IT971_02600
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
thad02000
]
IT971_02600
02044 Secretion system [BR:
thad02044
]
IT971_02600
Transporters [BR:
thad02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
IT971_02600
Secretion system [BR:
thad02044
]
Type I secretion system
Adhesin protein transporter
IT971_02600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_16
AAA_23
AAA_29
AAA_22
DUF4191
AAA_24
nSTAND3
NTPase_1
NACHT
AAA_25
EI24
CCDC39
Peptidase_M48_N
Motif
Other DBs
NCBI-ProteinID:
QPL36238
LinkDB
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Position
563590..565305
Genome browser
AA seq
571 aa
AA seq
DB search
MKRKPGLHIGTLSHLGAGRFAILLAAFVINLLSLALPVTLLQVYDRVLPHNAIPTLTLLI
LGVFGALVLEAALRLGRAYISSLSAAKFEHKSSQAAVGHLLATSLSDYEKTAPGLHLQRL
NSLNVLRDFYAGQAIGAVIDLPFIILFLGLIAIIGGKLVLVPLGILFAFMLTAMILGRRL
RRALDERSQADERRYNFIIETLTGIHTIKAMAMENLMIRRHDQLQIQCSEDDLVAARCAH
AAINSSASFSMITMILVAGVGSLLVINADLTVGGLAACTMLAGRSIQPLQRAMGLWTQFQ
SIRVARDRCRELFRLPPEDADDAAEMPPLEGRIELEDVSFSHAGGDTVFENLTLAIQPGE
SVAITGENGTGKTTLLWLLMGALRPDRGSVRLDGRDPGKYASESIRRQIAYLPQHGVMFK
GTILENITSFRKEIGTDRVVEISRRLGLDEIVMRMPDGYDTEVGGQASETLPRGVKQRIA
IARALIDYPRIVLFDEANSSLDIAGDNILAGLLIELRKHCTLVMVSHRPSLIALADRQYR
LMEKRLVPVLRRSGTQPVIEAEEVARAGGRS
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgcaagcctggcctgcatatcggcactttgtcacatctgggggcaggccgtttt
gccatattgctcgcagcatttgtgatcaacctgctgtcgctggcactgccggtgaccctg
ttgcaggtctatgaccgtgtgctgccccataatgccatcccgactttgaccttgcttata
ctcggggtttttggcgcgttggtgcttgaagcggctttgcgccttggtcgggcctacata
tcgtcgctgtcggcggcaaagttcgaacataaaagttcgcaggctgctgtcggtcatttg
ttggcgacaagtctttccgattacgaaaaaaccgcacctggcctgcatcttcagcggctg
aacagtctgaatgtcctgcgtgacttttatgccgggcaggcaatcggggcggtgatcgat
ctgccgttcattatcctgttccttggtttgattgccattatcggtggcaagctcgtgctg
gtaccgctgggcattctgtttgccttcatgctgaccgcgatgatcctggggcggcggttg
cgtcgcgcgcttgatgaacgcagtcaggccgacgagcggcgctataatttcattatcgaa
accctgaccggcattcacaccatcaaggcgatggcgatggaaaacctgatgatccgtcgc
catgatcaactgcaaatccagtgttcggaggatgaccttgtcgccgcgcgttgcgcccat
gccgcgatcaattcaagtgccagcttttcgatgatcacgatgatccttgttgccggtgtc
ggcagtcttctggttatcaatgccgatctgacagtgggtgggcttgccgcctgcacgatg
ctggccgggcgttcgatccagccgctgcaacgtgccatgggtctttggacccagtttcaa
agcattcgggttgcgcgtgatcggtgccgcgaacttttccgtctgccgcccgaagatgcc
gacgatgctgctgaaatgccgccgcttgaagggcgtatcgagcttgaagatgtcagtttt
tcgcacgcgggcggggacacagtttttgaaaatctgacgcttgcgatacagcccggtgaa
tctgttgcaatcaccggtgaaaacggcaccggtaaaaccaccttgctgtggcttctgatg
ggggcgttacgccctgatcgcggttcggtgcggcttgatggtcgtgatcccggtaaatat
gcatcggaatcgatccgccgccagattgcctatctgccgcaacatggtgtgatgttcaag
ggaacgatccttgaaaacatcacatccttccgcaaggaaatcggcacggatcgtgttgtg
gaaatttcacggcgtctggggcttgatgaaatcgtcatgcgcatgcccgacggttacgat
accgaagtgggcgggcaggcatccgaaaccctgccgcgcggcgtaaagcagcgtatcgcg
attgcgcgtgccctgatcgactatccgcgcatcgtgctgtttgacgaagccaacagttcg
cttgatatcgcgggtgacaacattcttgccggtcttctgattgaacttcgcaaacattgt
acgctggtgatggtatcgcaccgaccgtcactgatcgcccttgccgacagacaatatcgc
ctgatggaaaaacgtctggtgccggtcctgcggcgcagcggcacccagccggtgatcgag
gcagaagaagtcgcacgcgcaggaggccggtcatga
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