Thalassospira sp. B30-1: IT971_02605
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Entry
IT971_02605 CDS
T11046
Name
(GenBank) ATP-binding cassette domain-containing protein
KO
K12541
ATP-binding cassette, subfamily C, bacterial LapB
Organism
thad Thalassospira sp. B30-1
Pathway
thad02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
thad00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
IT971_02605
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
thad02000
]
IT971_02605
02044 Secretion system [BR:
thad02044
]
IT971_02605
Transporters [BR:
thad02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
IT971_02605
Secretion system [BR:
thad02044
]
Type I secretion system
Adhesin protein transporter
IT971_02605
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
AAA_21
SMC_N
Zeta_toxin
AAA_16
RsgA_GTPase
AAA_29
AAA_15
nSTAND1
AAA_23
AAA_22
MMR_HSR1
Dynamin_N
Motif
Other DBs
NCBI-ProteinID:
QPL36239
LinkDB
All DBs
Position
565302..567440
Genome browser
AA seq
712 aa
AA seq
DB search
MNIENMDFALNYRMGLASNDAQSDFDACLWPLLQALGWRGLPRQVAEALPHMDEALDLTD
FRNVLANLNYRSREIDTTFDRIDDRLMPCLFVPDNGTALVVIKPENAGIRVFDGGTSREM
VIKPVNLPGRLFQFTQAGRHERFFEEDKRGWFGGITDRFSALGGQLLLITLMLNLMALAS
PIFVMGIYDRVIGTRSIPMLIQFGIGMGIVLILDWVLRNLRSQMVSHFGARLDTLVSSAI
FERLLSLPPAFTERAPVGVQISRIRDFESVREFFSGPMALVILEMPFLPIFLIVLAILGG
WLALIPIGLIVVFVLIGLVSFPVVSRRVSELGRNGANRQEFLVETVGKMQALKYTGTEHR
WLSRFRDISADTAYAGFRVAMINNLINTSAQILMVSSGALILAFGAVQVMAGSMTVGALV
ASMMLAWRVLGPINQAFVGMPRLAQLRGSVRQINRLMTLAPERDLVPRTVGQRRFEGNVT
FSRVSFRYTPDSDPALVGVNFDIKAGQVVAVVGSNGAGKSSLIKLIAGMYQPQAGAVLID
GADIRQMDPQTLRQSISYVPQDVEFFRGSIAQNLRLANPIASPDELRMACMSAGILSEIE
ALPDGFETRIGDQHSSRFSTSFLQRLALARAFVREAPIILFDEPTNGLDQKADRAFQHAI
NRLRGGSTIFLITHRPSHLDLADRIIVLEAGQVRADAPPARIKQQVLDGGFL
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atgaatatcgaaaacatggacttcgcgctgaattaccgcatgggccttgccagcaatgac
gcccagtcggattttgatgcctgcctgtggcctttgttgcaggcgcttggctggcgtggg
ctgccccgtcaggtcgcagaagcattgccgcatatggacgaggcccttgatctgaccgat
tttcgcaatgtgctggcgaacctgaattaccggtcgcgcgaaatcgataccacatttgat
cggatcgatgatcggttgatgccctgtctgttcgtgcccgataacggcaccgcacttgtg
gtgatcaagccggaaaatgctggcatccgggtgtttgatggcggcaccagccgcgaaatg
gtgatcaagccggtcaatcttcccgggcggttgttccagtttacccaggctgggcgtcac
gaacggttttttgaagaggacaaacgcggctggtttggcggaataaccgaccggttttcc
gccctcggtggacagcttttgctgattaccctgatgctgaacctgatggcgctggccagc
ccgattttcgtaatggggatctatgaccgggtcattggaacgcggtcgatccccatgttg
atccagttcgggatcggcatggggattgtcctgatccttgactgggtcctgcgcaatctg
cgcagccagatggtcagccattttggggcgcgccttgatacacttgtcagcagtgccatt
ttcgaacggcttctgtccctgccacccgcctttaccgaacgtgccccggtcggggttcag
atttcgcggattcgcgattttgaaagcgtccgcgaattctttagcggcccgatggcgctt
gtcattctggaaatgcccttcctgccgatcttcctgattgttctggcgatccttgggggg
tggcttgcacttatcccgattgggctgatcgttgtttttgtcctgatcggcctggtgtct
tttccggtggtatcacgacgggtttcggaacttggccgcaatggtgcgaaccgtcaggaa
ttccttgtcgaaacggtcggcaagatgcaggcgttgaaatatacaggcacagaacatcgc
tggctgtcgcgtttccgcgatatttcggccgatacggcttatgccgggttccgggtggca
atgatcaataatctgatcaacacatcggcacagattctgatggtctcatccggggcgctt
atccttgcctttggcgcggttcaggtcatggcgggttcaatgaccgtcggcgcacttgtg
gcatcgatgatgctggcatggcgtgtacttggcccgatcaatcaggcgtttgtcggtatg
ccgcggctggcacagcttcgcgggtctgtccggcagataaaccgtctgatgacgctggca
ccggaacgtgatctggtgccgcgcacggttggccaacgccgtttcgagggcaatgtcacc
ttctcgcgtgtcagcttccgatatacgccggactccgatccggctctggtcggggtgaat
ttcgatatcaaggccggacaggtggttgcggttgtcggatcgaacggggcgggcaagtca
tcgctgatcaaattgatcgccgggatgtatcagccacaggccggtgctgttctgatcgac
ggcgcggacatccgccagatggatccgcaaaccttgcgtcagtccatttcctatgtgccg
caggatgttgaatttttccgtggatcaattgcgcaaaacctgcgccttgccaatccgatc
gcatcacccgatgaattgcggatggcctgtatgtcggcgggtattctttcggaaatcgaa
gccctgcccgacggttttgaaacacggatcggcgatcagcattcctcgcgcttttcgaca
agcttcctgcaacgcctggcacttgcgcgtgcctttgtccgcgaagcaccgatcatcctg
tttgacgagccgaccaatggtctggatcaaaaagcggatcgggcattccagcatgcgatc
aaccgtctgcgcggcggatcgacgattttcctgattacccatcggccaagccatcttgat
ctggccgaccgcatcattgttcttgaagcaggtcaggtgcgcgccgatgcgccgccagca
cgcatcaagcagcaggtgcttgacggaggtttcctatga
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