Thalassospira sp. B30-1: IT971_02835
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Entry
IT971_02835 CDS
T11046
Name
(GenBank) ATP-binding cassette domain-containing protein
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
thad Thalassospira sp. B30-1
Pathway
thad02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
thad00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
IT971_02835
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
thad02000
]
IT971_02835
Enzymes [BR:
thad01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
IT971_02835
Transporters [BR:
thad02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
IT971_02835
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
RsgA_GTPase
AAA
AAA_21
AAA_16
AAA_29
AAA_24
AAA_22
MMR_HSR1
AAA_15
AAA_25
AAA_23
AAA_30
APS_kinase
DUF5906
Zeta_toxin
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
QPL36284
LinkDB
All DBs
Position
complement(627494..629224)
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AA seq
576 aa
AA seq
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MIRRIVQDAVAPYFGKIVLALICMALMAAATGGYAYLMDPVINEVFVKKNPAMLVPVGVA
VLAAFALKGFANYGQSVLMSYVGGRILADIQNKLYEHVIRLDIGFFHNTNTGKLITRFTS
DITAMRAAVSVSLTGFGKDFLTAIVLIGVMFYQDWQLAIIAFTVFPAAILPIARLGKRMR
KVSANTQQQIGEFATLLEQTFQGVRHVKAYGMEPYECSRMEKLVETVFDLSFKAQKVSAR
SSPIMETLGGAAITTIIIYGGSRVIDGASDPGSFFSFITALLLAYEPVKRLANININLQA
GLAASQRVFTVLDIEPEIRDADDAKTLQVKGGAIQFKDVSFSYNNETTALRNISLDIEAG
QTIALVGPSGAGKSTILNLIPRFYDINAGAITIDGQDIRDVTLESLRSATALVSQEITLF
DDTVRSNIAYGRFGASDAEIEEAARHAAAHDFILQLENGYDTIVGEHGVKLSGGQRQRIA
IARAMLKNAPILLLDEATSALDTESERHIQGALTELMKGRTTLVIAHRLSTIVDADKICV
IQNGHVTEQGRHEELLALGGAYANLYNLQFSEESDN
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atgatcagacgcatcgttcaggatgcggttgccccttatttcggcaagattgttctggct
ctgatttgcatggcgcttatggctgccgcgactggcggttatgcctatctgatggatccg
gtgattaacgaggtctttgtcaaaaagaacccggcgatgctggtccctgtcggggttgcc
gtccttgcggcttttgcgctgaaaggctttgccaactatgggcagtcggttttgatgagc
tatgtcggtggtcgcatccttgccgatattcagaacaagctttacgaacatgtcatccgg
cttgatatcgggttcttccacaataccaataccggcaaactgatcacgcgtttcaccagc
gatatcaccgcgatgcgggccgccgtttccgtatcactgaccggctttggcaaggacttt
ttgaccgccatcgtgctgattggcgtcatgttctatcaggattggcagcttgccatcatt
gcgttcacggtgtttcccgccgccattctgccgattgcccgtctgggcaagcgcatgcgc
aaggtttccgccaacacccagcagcagatcggtgaatttgcaaccctccttgaacaaacc
ttccaaggtgtccgccatgtcaaagcttatggcatggagccctatgaatgttcgcggatg
gaaaagcttgttgaaaccgtctttgatctgagcttcaaggcgcagaaagtcagtgcacgt
tcgtcccctatcatggaaacactcggcggcgctgcgatcacgaccatcattatttacggc
ggtagccgcgtcattgacggggcaagcgatccaggcagtttcttttcgttcatcaccgcc
ctgttgctggcctacgagccggtcaagcgccttgccaatatcaatatcaatctgcaggcc
ggtcttgcagcatcgcagcgcgtgtttaccgtccttgatatcgaaccggaaattcgcgat
gccgacgatgccaaaacgcttcaggtcaagggtggcgccatccagttcaaggatgtttcc
ttttcttataacaatgaaacgacggcgctgcgtaacatcagccttgatatagaggccggt
cagacgattgcccttgtcgggccatcaggggccggtaaatcgaccatcctgaacctgatc
ccgcggttctatgatatcaatgccggtgcaatcacgattgatggtcaggatatccgcgat
gtaacgctggaaagcctgcgatcagcgaccgcactggtcagccaggaaatcacgctgttt
gacgatacggttcgatccaacatcgcctatggccgatttggcgcaagcgatgccgaaatc
gaagaagccgcgcgtcatgcagcagcccatgatttcatcctgcaacttgaaaacggttat
gacaccattgtcggcgaacatggtgtgaagctttcaggcggccagcgccagcggatcgcg
attgcacgtgcgatgctgaaaaacgccccgatcctgcttctggacgaggcaacatcagcc
cttgatacggaatccgaacgccacattcagggggccctgaccgaattgatgaaaggacgg
acgacgcttgtcatcgcgcaccgcctttcgacgattgtcgatgccgacaaaatttgcgtc
attcagaacgggcatgttaccgaacagggacgccatgaagaattgcttgcgcttggaggg
gcttacgccaatctctataatctgcaattctcggaagagagcgataactag
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