Thalassospira sp. B30-1: IT971_04290
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Entry
IT971_04290 CDS
T11046
Name
(GenBank) HAMP domain-containing protein
KO
K03406
methyl-accepting chemotaxis protein
Organism
thad Thalassospira sp. B30-1
Pathway
thad02020
Two-component system
thad02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
thad00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
IT971_04290
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
IT971_04290
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
thad02035
]
IT971_04290
Bacterial motility proteins [BR:
thad02035
]
Flagellar system
Chemotaxis proteins
MCPs
IT971_04290
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MCPsignal
dCache_1
MCP-like_PDC_1
HAMP
DUF1664
TMP_3
DUF948
COG5_N
Laminin_II
PIN_8
Motif
Other DBs
NCBI-ProteinID:
QPL36547
LinkDB
All DBs
Position
complement(938781..940856)
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AA seq
691 aa
AA seq
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MRFSNMSLGAKLTCVSALAIAFCLIVGIFLQTVQTGKTTEELTVGEARAVGQFHAEQASR
VLNGGMLVAKNLAGAFRALREQGGADRKAYNEILNRTLMDNPSLAGAWSGFETNALDGKD
ADYKGEGEPFGDGSGKYVTYYYNFGGGITPYHLTGLDNPEVNEYYTEPKRTNKPYLTDAI
TYDIQGRDVVLTSFVYPVQDSGGKFLGVMGVDLELNALSERFAELAPFGTGTVNLVSAQG
TWVAHENPDIRGTKLDVANPTDAAILEAMKSGQSGQIDDGEVMHLIVPVAIEGYANQWGV
VVNVPLATVYAPADDLRNATLIGGVVLLIVVIAVILLSTNAMVARPMTRVAGVIADLEKG
NFNVTVPYHDRSDEIGAIAKALEAFKEASAGMQQAERDKREAEHRASEERNRTRLQMADE
FEKSVGSIVVHVTDSAGDMEKVSRQMRRAANESSEQATVVAAAADEASANVQTVASASEE
LSASIQEISSQVARSSEIANNAVDEASRANAMVTGLAEAADRIGQVVSLINDIASQTNLL
ALNATIEAARAGEAGKGFAVVASEVKNLANQTAKATEEIAQQIGSIQSETHNTVGAIEKI
TETISNINEITGAIAAAVEQQGAATAEISGNVQQAAAGTNEVSSSIGIVRNTSQQTGDAA
SNVQAGATELAEQARNLDTQVKNFLERLRNI
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atgcgattttccaatatgtctcttggtgccaagctgacctgcgtcagtgcactcgcaatt
gccttctgtctgatcgtcggcatcttccttcaaactgtccagaccggcaaaacaaccgaa
gagctgaccgtgggcgaagcccgtgccgttggccagttccatgccgaacaggccagccgg
gtgctgaatggcgggatgctggttgccaaaaaccttgcaggtgcctttcgcgcacttcgt
gaacagggcggagcagaccgcaaggcctataacgaaatcctcaatcgcaccctgatggac
aacccctcccttgccggggcgtggtccggatttgaaaccaacgcccttgacggcaaggat
gccgattacaagggcgaaggcgaaccgtttggcgacggcagcggaaaatatgtcacctat
tattataacttcggtggcggcattaccccctatcacctgaccgggctcgataacccggag
gtcaatgaatattacaccgaaccaaaacgcaccaataagccctacctgaccgatgcgatt
acctatgacattcagggccgcgatgtggttctgacatcgtttgtctatccggtgcaggac
agcggcggaaagtttcttggtgttatgggtgtcgatcttgaactgaatgcgctgtcggaa
cggtttgccgaactggccccgtttggcaccggcaccgtcaatcttgtttccgcacagggc
acatgggttgcccatgaaaaccccgatatccgcggcaccaaacttgatgtcgccaatcca
accgacgcggccattcttgaagcgatgaagtcgggccagtccggtcagattgacgatggc
gaagtcatgcacctgatcgttccggtcgccattgaaggttatgccaaccagtggggcgta
gtcgtcaacgtgccgcttgccaccgtttatgccccggccgatgacctgcgcaatgcaacc
ctgatcggtggtgtggtacttttgatcgttgtgatagcggtgatcctgctgtcgaccaac
gccatggttgcccgcccgatgacccgtgttgccggggtgattgccgatctggaaaagggc
aatttcaacgtcaccgtcccctatcatgaccggtccgacgaaattggtgcgattgccaag
gcgctcgaagctttcaaagaagcatccgcgggcatgcagcaggccgagcgcgacaaacgc
gaggccgaacatcgcgccagcgaagaacgcaaccgtacccgcctgcagatggccgacgaa
ttcgaaaagtcggtcggctccatcgttgttcatgtcactgacagtgctggcgatatggaa
aaagtctcgcgtcagatgcgccgtgccgcgaacgaaagctcggaacaggcaaccgtggtt
gctgcggctgccgacgaggccagtgcgaatgtccagaccgtcgcttcggcaagtgaggaa
ctttccgcttccattcaggaaattagctcgcaggtcgcacgttcttctgaaatcgccaac
aatgcggtcgacgaagcatcacgtgccaacgccatggtcaccggcctggccgaagccgcc
gaccgcatcggtcaggttgtcagcctgatcaatgatatcgcgtcccagaccaaccttctg
gccctgaacgccaccatcgaggccgcccgcgcgggtgaagcgggtaaaggctttgcggtc
gtcgcaagcgaggtcaaaaaccttgccaatcagactgccaaggcgacagaggaaatcgcc
cagcagatcggatcgatccagtccgagacccacaataccgtcggcgcgattgaaaagatc
actgaaacaatttccaacatcaatgaaatcactggcgcaattgccgccgcggtcgaacaa
cagggcgctgccacggccgaaatttcgggcaatgtccagcaggccgcggcaggcaccaac
gaagtatcctcctcaatcgggatcgtacgcaatacgtcccagcaaaccggcgatgccgct
tccaacgtgcaggccggggcaaccgaactggccgaacaggcccgcaaccttgatacacag
gtcaaaaacttccttgagcggttgcgtaacatctag
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