Thalassospira sp. B30-1: IT971_06890
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Entry
IT971_06890 CDS
T11046
Name
(GenBank) HAMP domain-containing protein
KO
K03406
methyl-accepting chemotaxis protein
Organism
thad Thalassospira sp. B30-1
Pathway
thad02020
Two-component system
thad02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
thad00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
IT971_06890
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
IT971_06890
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
thad02035
]
IT971_06890
Bacterial motility proteins [BR:
thad02035
]
Flagellar system
Chemotaxis proteins
MCPs
IT971_06890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MCPsignal
HAMP
TorS_sensor_domain
4HB_MCP_1
BORCS6
DUF1664
Motif
Other DBs
NCBI-ProteinID:
QPL37023
LinkDB
All DBs
Position
complement(1461466..1463637)
Genome browser
AA seq
723 aa
AA seq
DB search
MGIKFGVQSKLLISFALVGLMAVVSAVVGAVSFNKFGEALTTITEEKLPPIAAAQQLATE
SAEIVAIAPRIVASNSTDEELAIKEELDFRLLELVNKINEIESTGFMPDVIATINDNRIQ
LQDTLGQLHTVTQERFAISTEKAEKLSEFQDLAKRYGDTLKPVLSYTQNDIAQGNAYAQS
LKDDPSAKYTASTEEVVENFIKMNEAISARSPVLEIERLGSSAANMIIASTTETQAVRLS
IIPVRIRGTYADALAALDSIGNERLKNFYVELIDKMQKLSVGDDSLPELRKRELAAAEES
QRLVIQSGEYANAMRSGVSELVAALNSEVDDAATQAKVVEKQSLTALAVVAIAAILISLI
IYVVYVRGNLLRRLAGLQTTMVTLADGNLDIDVPVKGNDEITAMGRAVEVFKDNALKVRE
LQAEEERLNRERNEALRDELLGLADTLQNEVESAVGEIAALAEQLQGVSGQMSQSAELVS
GQTEDVASSAQEATGNVETVAAATEQLSASNAEINRQMAESTRISNNAADRAQETNQLVV
SLSQSANRIGEVIALITDIAEQTNLLALNATIEAARAGDAGKGFAVVAAEVKNLANQTEK
ATEEIAGQISGIQKATGESVTAIEDIGRIIENINEIATTISAAVEEQGAATDEITRNVRS
AADRTRTVSSSINDVASETGKTGELSGQVLATAQTASEKVENLRSRINGILEDLRQQARD
RAS
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgggaattaagttcggggtccaaagcaaacttctgatatcgtttgcattggtcggattg
atggcggtggtttctgccgttgtgggtgccgtgtctttcaacaagttcggcgaagctctg
accaccattacagaagaaaaactgccgccgatcgccgcggcacagcaactggcgaccgaa
agcgcggaaatcgtcgcaattgcgccgcgcatcgtcgcatccaattccacagatgaagaa
ctggccatcaaggaagaacttgatttccgcctgctggaactggtcaacaagatcaacgaa
atcgaatcaaccggcttcatgcccgacgtgattgccacgatcaatgacaaccgcattcag
ttgcaggacacccttggtcagttgcacacagtcacccaggaacgttttgccatttcgacc
gaaaaggccgaaaaactaagcgagttccaggaccttgcaaaacgctatggcgataccctg
aaaccggttctgtcctatacccagaatgacatcgcgcagggcaacgcctatgcgcagtca
ttaaaggacgacccgtccgccaaatacacggcaagcaccgaagaagtcgttgaaaacttc
atcaagatgaacgaggccatcagcgcacgttcaccggttctggaaatcgaacgtcttggt
tcgtctgctgccaacatgatcatcgcgtcaaccaccgaaacgcaggccgtgcgtctgtcg
atcattccggtgcgtattcgcggcacctatgccgatgcactggccgcccttgattccatc
gggaacgagcgactgaagaacttctatgtcgaactgatagacaagatgcagaagctctcg
gtcggggatgacagcctgccggagcttcgcaaacgcgaacttgccgccgccgaggaaagc
cagcgtctggtcatccagagcggtgaatacgccaacgcaatgcgcagcggcgtttccgaa
ctggtcgccgccctgaactccgaagtcgatgacgccgccacacaggcaaaagtcgtcgaa
aaacaaagcctgacggcactggccgttgtcgccatcgccgccatcctgatctcgctgatc
atttatgtggtctatgtgcgtggcaaccttctgcgccgtcttgccggtctgcaaaccacc
atggtgacactggccgatggcaatcttgatatcgacgtcccggtcaagggcaatgacgaa
atcaccgccatgggccgcgcggtcgaggtgttcaaggacaacgcccttaaggtgcgcgaa
cttcaggccgaagaagaacgcctgaaccgtgaacgcaacgaagcactccgtgacgagctg
cttggccttgccgacaccctgcaaaacgaagtcgaaagtgcggtcggtgaaatcgccgcc
ctcgccgaacagcttcagggtgtatcgggccagatgagccagagcgccgaactggtttcc
ggccagaccgaagatgtcgcatcttcggcccaggaagccaccggcaacgtcgaaaccgtt
gccgccgccaccgaacagctttcggcctctaacgcggaaatcaaccgtcagatggcggaa
tcgacccgcatttccaacaatgccgccgaccgcgcacaggaaaccaaccagctggtggtc
agcctgtcgcaatcggcaaaccgcatcggcgaggtcatcgcactgatcaccgacattgcc
gaacagaccaaccttctggcccttaacgccaccatcgaagcggcccgtgccggcgatgcg
ggcaagggctttgcggttgtcgccgccgaggtcaagaacctcgccaaccagaccgaaaag
gcgaccgaggaaattgccggtcagatttccggcatccagaaggcgaccggggaatccgtt
accgccatcgaggatatcggtcgcatcatcgaaaacatcaacgagattgccaccaccatt
tcggccgcggtcgaagaacagggtgcggcaaccgacgagatcacgcgtaacgtgcgtagt
gcagccgaccgcacccgaaccgtttcgtcctcgatcaatgatgtggcaagtgaaaccggc
aaaaccggcgaactttccggtcaggttctggcaacggcacagaccgcatccgaaaaggtc
gaaaatctgcgctcgcggatcaacggcatcctcgaagacctccgtcagcaggcacgtgat
cgcgcctcctga
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integrated database retrieval system
