Thalassospira sp. B30-1: IT971_08920
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Entry
IT971_08920 CDS
T11046
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
thad Thalassospira sp. B30-1
Pathway
thad02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
thad00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
IT971_08920
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
thad02000
]
IT971_08920
Transporters [BR:
thad02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
IT971_08920
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
QPL37392
LinkDB
All DBs
Position
1859704..1861653
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AA seq
649 aa
AA seq
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MKPTIVPAFSAGWFNKSRMAFVCVGFSAAMFAGMISAVGPAKAEIPYFEDAVSKGELPPM
AARLPEHPNVIDFTAENKEIGKYGGDLVTIMGRSRDIRMAVVYGYARLIGYDENLNLQPD
ILESLDVNDTGNVFTLHLRKGHKWSDGEPFTAEDFRYFWEDVVNNDELFPVGPPRFLFVG
DEPATFEILDEYTVRYSWSKPNPFFVTELAATRPPFIYRPAHYLKQFHAKYRDAAELDAI
VKERGLRSWAVLHTDKDRPYRLENVERPSLEPWLIRTEEPSDRFIFERNPYYHRVDPDGN
QLPYIDRMIFNISNAKLVPAKVGAGEVDLQSRILSLQDYTFLKQSEPQQNFKVNLWDVGY
GAYAALYPNLTCSDPVWRKLLRDVKFRRALSLAINRTEINRVMFFGLAAPTNNTVLPKSP
LFKQEYRDSYIEFDVKKANALLDEMGLTKRNGDGIRLMPDGRPLEIIVETMGENPEHDDM
LELIGDSWKQIGVKLFVKGLQREVLRNRAYSGETIMSIFNGVDSGLATPGTVPAEFVPIQ
QDSLQWPKWGQYFQTNGEAGEAPDMPAAKELMDLYGKWANGNDAARKDAWQRILDINAEN
MFSIGLIGNVPQPVVVRNDLRNVPEKGIHSWEPGAFFGIYRPDTFWWDR
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atgaagccgactatcgttcctgcgttctctgcgggttggtttaacaaatcgcgcatggcg
ttcgtatgtgtggggttctcggcggcaatgtttgcggggatgatatcggcggtcggcccg
gcaaaggctgaaattccgtatttcgaggatgccgtatcaaagggggaattgcccccgatg
gcggcacgtctgcctgaacatcccaacgtcatcgacttcactgccgagaataaggaaatc
ggcaaatatggcggtgatctggtgaccatcatgggccgttcgcgcgatattcgcatggcg
gtggtttatggctatgcccggttgatcggatatgacgagaacctgaacctgcaacccgat
attctcgaaagccttgatgtcaacgataccggtaatgtattcaccctgcatcttcgcaaa
ggccataaatggtccgatggtgaaccctttaccgccgaggatttccgctatttttgggaa
gacgtcgtcaataacgatgaactgtttccggtcggtccgccgcgtttcctgtttgttggc
gatgaaccggcaacattcgagattctcgacgaatataccgttcgttacagttggtccaaa
cccaacccgtttttcgtaacggaactggctgcaacccggccgcccttcatttatcggcct
gcacattatctgaaacagtttcacgcgaaatatcgcgatgcggccgagttggatgcgatt
gtcaaagaacggggcttacgcagctgggcggtgcttcatacagataaggaccgtccttac
cggcttgaaaatgtcgaacgtccatcgctggaaccatggctgatcaggaccgaagaaccg
tctgatcgcttcatctttgaacgtaacccgtactatcatcgcgttgatccggatggcaat
cagctgccttatattgatcggatgatcttcaatatctcgaatgccaaactggttccggcc
aaggtcggcgcgggcgaggttgatctgcaaagccggattctgtccttgcaggattacacc
ttccttaaacagtccgagccgcagcaaaacttcaaggtgaacctttgggatgtcggttac
ggtgcctatgcggcactttatccgaacctgacctgttctgatccggtctggcggaaatta
ttgcgcgatgtgaaattccgccgggcattgtcgcttgccatcaaccgaacagagatcaac
cgggtgatgttctttggtctggcggcaccaaccaacaatacggtcctgcccaaaagcccg
cttttcaaacaggaataccgcgacagctatattgagttcgatgtcaagaaggccaatgcg
ctgcttgatgaaatgggcctgaccaagcgcaatggcgatggtattcgtttgatgcccgat
ggtcgaccgcttgaaatcattgtcgaaaccatgggcgaaaaccccgaacatgacgacatg
cttgaactgatcggggatagctggaaacagattggtgtaaagctgttcgtcaagggattg
cagcgcgaagttctgcgcaatcgggcctatagcggcgaaaccataatgtcgatctttaat
ggtgtcgatagcggccttgcaacgccgggtacagttccggcggaattcgttccgatccag
caggacagcctgcaatggccgaaatggggacagtatttccagaccaatggcgaggcgggc
gaagcaccggatatgcccgccgccaaggaactcatggacctttatggtaaatgggccaat
ggcaatgacgcggcccgaaaggacgcatggcagcgtattctcgatatcaatgcggaaaac
atgttctctatcggtctgatcggtaatgtgccgcagccggtcgtggttcgcaacgatctg
cgcaacgtgccggaaaagggcatacatagctgggaaccaggtgcattctttggcatttac
cgtcccgatacattctggtgggaccgttga
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