Thalassospira sp. B30-1: IT971_09805
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Entry
IT971_09805 CDS
T11046
Symbol
secD
Name
(GenBank) protein translocase subunit SecD
KO
K12257
SecD/SecF fusion protein
Organism
thad Thalassospira sp. B30-1
Pathway
thad02024
Quorum sensing
thad03060
Protein export
thad03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
thad00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
IT971_09805 (secD)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
IT971_09805 (secD)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
IT971_09805 (secD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
thad02044
]
IT971_09805 (secD)
Secretion system [BR:
thad02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
IT971_09805 (secD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SecD_SecF_C
SecDF_P1_head
SecD_1st
Sec_GG
ACR_tran
MMPL
SecD-TM1
Dis32-like_C
DUF4853
Sterol-sensing
NMB0315_dom_I
Motif
Other DBs
NCBI-ProteinID:
QPL37557
LinkDB
All DBs
Position
complement(2019275..2021851)
Genome browser
AA seq
858 aa
AA seq
DB search
MRTSRWRVVVYSLVLLTGFLTALPNLFTPAQLADWPSFLPTRQVALGLDLRGGSHLVLEI
DTAAMIAERLEITRDDVTTALRKAHIDVNSIQISNDQVIVSLSDTKDHDGALDALEYLAN
AQVETPRHGSTAEFVITAPSDNSIHIALSEQGIRNRVDASAQQSLEIIRSRIDQIGVSEP
TIQRIGSDRVLVQLPGVQDPSQVRKLLGSTAKLGFYMLADRSRTDKRDSSVLTLQDKDGQ
SYHLHRTPALSGDHLTDAHAGFDPQSHQPVVNFRFDTAGAAKFADITRANVGKPFAIVLD
NEVLSAPVIREAITGGSGQISGSFTVGETVTLSALLRAGSLPAPMTVIEERTVGPDLGAD
AIEMGLYTGLIGLGLVTGLMFFLYGRWGMIANLALGLNVMLTFGALSLMGATLTLPGIAG
IVLGIGLAVDANVLINERIREETKRGLSAFMALDSGFKRAYATIVDSNITTLIATALLFE
FGSGPVRGFAITMGLGIVISMFTAVAVVRVIMTEIVWRTRMKKLVIEPLWRFMPEKTSIS
FMRARFLGIGMSLLLSAISIGLFFKPGLDYGVDFKGGIQVEVASSSANDGNSPLDLGALR
QELSTLGLGDVSLQDIGKDGHILIRVERQPGGEQAQTAAVETVKKAVQSIDPAADFERTE
VVGPKVSGELAQSGVSAVIFASLAMLCYIWWRFEWPFAVGAIVTLILDVTKTIGFFAIMG
LDFNLTAIAALLTLIGYSVNDKVVVYDRMRENLRLYRKMPMREIIDMSINQSLARCLFTS
LTTLFAMVPMAIWGGSAVESFAVPMVFGVVIATTSSIYIAAPILLFLDTWRQKQRQKHAR
LASETDIDDNPLIKKASS
NT seq
2577 nt
NT seq
+upstream
nt +downstream
nt
atgcgtacatcaagatggcgcgtggttgtctatagccttgtccttctgacaggttttctg
acagccctgccaaaccttttcaccccggctcagcttgcagactggccctcatttttacca
acacgccaggttgcccttggccttgatctgcgcggcggatcgcaccttgtgcttgaaatc
gatactgcggcaatgatcgccgaacgccttgaaatcacacgcgatgatgtcacaaccgcc
cttcgcaaagcccatatcgacgtcaacagcattcagatcagtaatgatcaggtgattgta
agcctgtctgataccaaggaccacgacggtgcccttgatgccctggaataccttgccaat
gcgcaggttgaaacaccacgacacggatcaacggcagaatttgtcattaccgcgccatcc
gataacagcatccatatcgcacttagcgaacagggcattcgcaaccgggtcgacgccagc
gcccagcaaagccttgagatcattcgaagccgcattgaccagataggcgtatcggaacca
acgatccagcggattggcagtgatcgtgttctggttcagttgcccggcgttcaggacccg
tcacaggtccgaaaacttctgggcagcaccgcaaagcttggcttctatatgctcgcggat
cgcagcaggaccgataaacgcgacagcagcgtactaactttgcaggacaaggacgggcaa
agctatcacttgcatcgtactccagccctttcgggcgatcatctgacagatgcccatgcc
ggatttgatccgcaaagccatcaaccagttgtcaatttccggtttgatacggccggtgcg
gcaaagttcgccgatatcacacgcgccaatgttggaaaaccctttgccattgttctggac
aacgaagtccttagcgcaccagtcatccgggaagcgataaccggtggctcgggccagatc
agcggcagctttacggttggtgaaacggtaacactttctgcacttcttcgtgccgggtcc
ctgcctgcaccaatgaccgtgatcgaagaacgaaccgtcggccccgaccttggtgcagat
gccatcgagatgggcctttataccggcctgatcgggttgggactggtcaccggattgatg
tttttcctgtatgggcgatggggcatgatcgccaatctggcacttggccttaacgtcatg
ctgacattcggcgcactgagcctgatgggagcaacactgaccctgcccggtattgccggg
attgttttggggatcgggcttgcagttgatgccaacgttctgatcaacgaacgtatcagg
gaagaaaccaaaaggggcctttcggcgttcatggcgctcgattccgggttcaagcgtgct
tatgccacgattgttgattccaacataacaacccttatcgcaaccgcccttttgtttgag
ttcgggtccggcccggtgcgtggctttgccatcaccatgggtcttggcatcgtgatttcg
atgtttaccgcggttgccgtggttcgggtcatcatgaccgaaatcgtctggcgcacccgt
atgaaaaagctcgtcattgaaccgctttggcgtttcatgcccgaaaaaaccagcatttct
ttcatgcgggcacgttttctcggcatcggaatgtcgcttttgctgtctgctatttcaatc
ggattgttcttcaaacccggtcttgattacggggttgatttcaagggcggcattcaggtt
gaagttgccagtagcagtgcgaatgacggtaacagcccgcttgaccttggagccttgcga
caggaactttcgacattggggcttggcgatgtcagccttcaggatatcggcaaggatggc
catatcctgatccgggttgaacgtcagccgggcggcgaacaggcacagacagcagccgtc
gagacagttaagaaagccgtacaatcaattgatccggcagcagattttgaacgcacagaa
gtcgttggtcccaaagtcagcggtgaattggcccaatctggtgtcagcgctgtcatcttc
gcaagcctcgcgatgctgtgctatatctggtggcggtttgaatggccatttgccgttggc
gcgattgtgacattgatccttgatgtgaccaagaccatcggctttttcgcgattatgggg
ctcgacttcaacctgacggccattgcagccctgctcaccctgatcggctattcggtcaat
gataaggtggtggtttatgaccggatgcgcgaaaacctgaggctttatcgaaaaatgccg
atgcgtgaaatcatcgacatgtcgatcaaccagtcacttgcccggtgccttttcacatct
cttacaaccctttttgcgatggtgccaatggcgatctggggcgggtctgccgttgaaagt
tttgccgttccgatggtgttcggcgttgtgattgccacgacatcgtcgatctatatcgcg
gcaccaatcctgctgttcctcgacacatggcgacagaaacaacgccagaagcatgcacgg
ctggcatcagaaaccgacattgatgacaatcccctgataaaaaaggcatccagttaa
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