Thalassospira sp. B30-1: IT971_10870
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Entry
IT971_10870 CDS
T11046
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
thad Thalassospira sp. B30-1
Pathway
thad03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
thad00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
IT971_10870 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
thad03019
]
IT971_10870 (recQ)
03400 DNA repair and recombination proteins [BR:
thad03400
]
IT971_10870 (recQ)
Enzymes [BR:
thad01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
IT971_10870 (recQ)
Messenger RNA biogenesis [BR:
thad03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
IT971_10870 (recQ)
DNA repair and recombination proteins [BR:
thad03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
IT971_10870 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
RecQ_Zn_bind
Helicase_C
ResIII
Motif
Other DBs
NCBI-ProteinID:
QPL37754
LinkDB
All DBs
Position
2227155..2229005
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AA seq
616 aa
AA seq
DB search
MPDTIPLTGLLDRPAQRLPIDVLREVFGYDSFRGQQAEIIDHVIAGNDALVLMPTGGGKS
LCYQIPALCRSGTAIVVSPLIALMKDQVDALSQLGVKAAFINSTLSPDAAREIETRAIDG
DIDLLYVAPERFATDRFLNLLDRISISLFAIDEAHCVSQWGHDFRPEYRRLDLLPTRFPH
VPRVALTATADTPTRKDIAENLHLTNAQCFLTGFDRPNITYRIETKGNSKQRLLSFLNRE
HPEDAGIVYCLSRRKTEDVAQWLTDNGRPALPYHAGLTQETRQLHQDRFLREDGLIICAT
VAFGMGIDKPNVRFVAHLNLPKSMEAYYQETGRAGRDGLPANAWMNYDLSDIVSIRSMLA
SSDAPDSQKRIESRKLDALVGLAETTRCRRQVILSYFGEEDTKPCGNCDTCLEPVDTWDA
TEASRKALSAVYRTGQRFGPAHIIEVLMGRKTEKIRQNNHDDLSVYGIGKDVSQPQWRSV
FRQLLAMGYLQVDVEGHGGVYLTEESRPVLRGEKVVEMRKDPGESKRTMTKRLRDFDTEF
ENEEDRDLWERLRTLRRELATSQNVPPYVIFSDRTLWEMVRFKPRTLQDMASINGVGVKK
LDQYGLVFLDVMDGRR
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
ttgcccgatacaatacccctaaccggcttgctcgaccgacctgcgcaacgtctgccgatt
gacgttctgcgggaagtttttggctatgacagttttcgcggtcagcaggccgaaatcatc
gatcatgtgattgccggaaacgatgcactggtcctgatgccgaccggtggcggcaaatct
ttgtgttatcagatccctgccctttgtcgttcgggaacggcaattgttgtatcgcccctg
attgccttgatgaaggatcaggtcgatgcgctaagccagcttggggtcaaggcggccttt
atcaattcaacactttccccggacgcggcgcgcgaaatcgaaacccgcgcaattgatggc
gatatcgatctgctttatgtcgccccagaacggtttgcgacggatcgttttctgaacctg
cttgaccggatcagcatatcgctgtttgccattgacgaagcacactgtgtttcgcaatgg
gggcatgatttccgcccggaataccgtcggcttgaccttctgccaacgcgtttcccgcat
gtaccgcgggttgccttgaccgcaaccgcggacacgccaacccgcaaggacattgccgaa
aacctgcatctgacaaatgcgcaatgcttcctgaccggctttgaccgcccgaacattacc
tatcggatcgagacaaagggaaattcaaagcagcgccttctgtcgtttctgaaccgtgag
catcccgaagatgccgggattgtctattgcctgtcgcgtcgcaagaccgaggatgtcgcg
caatggcttaccgataacggtcgcccggccttgccttatcacgcaggtctgacacaggaa
acaagacagcttcatcaggacaggttcctgcgcgaagacggtctgatcatttgcgctacg
gtcgcctttggcatggggatcgacaagccgaatgtccgttttgtcgcccatctgaacctg
cccaagagcatggaagcctattatcaggaaaccggccgtgcgggccgcgatggtctgcca
gccaatgcatggatgaattacgatctgtccgatatcgtttccattcgttccatgctggca
tcatccgatgcgcccgacagtcagaaacgcatcgaaagccgcaaactcgatgcgctggtt
ggccttgccgaaaccaccagatgccgccgacaggtgattttgtcctatttcggcgaagaa
gacacaaaaccctgtggcaattgcgatacctgccttgaaccggtcgatacctgggatgcg
accgaggcatcgcgtaaggcactttcggcggtctatcgtaccggacagcggttcggacca
gcccacatcatcgaagtcctgatgggacgcaagaccgaaaaaatccgtcagaacaaccat
gacgatctgtccgtctacggtattggcaaggatgtctcacagccgcaatggcggtcggtt
ttccgccagttgcttgccatgggatatcttcaggtcgatgtcgagggacacggtggcgtt
tacctgaccgaagaatcccgccccgtcctgcgcggcgaaaaagtcgttgaaatgcgcaag
gacccgggcgaaagcaaacgcaccatgaccaaacggctgcgtgatttcgataccgagttc
gagaacgaggaagatcgtgatctttgggagcgcctgcgcaccctgcggcgcgagcttgcc
accagccagaatgttccgccttatgtcattttcagtgacagaaccctttgggaaatggtc
cgcttcaaaccacggacattgcaggatatggcatcaatcaacggggttggcgtcaagaaa
ctcgaccagtacggtcttgttttccttgatgtcatggatggtcggcgctga
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