Thalassospira sp. B30-1: IT971_12860
Help
Entry
IT971_12860 CDS
T11046
Name
(GenBank) HAMP domain-containing protein
KO
K03406
methyl-accepting chemotaxis protein
Organism
thad Thalassospira sp. B30-1
Pathway
thad02020
Two-component system
thad02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
thad00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
IT971_12860
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
IT971_12860
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
thad02035
]
IT971_12860
Bacterial motility proteins [BR:
thad02035
]
Flagellar system
Chemotaxis proteins
MCPs
IT971_12860
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MCPsignal
HAMP
4HB_MCP_1
CHASE3
DUF948
DUF1664
Motif
Other DBs
NCBI-ProteinID:
QPL34074
LinkDB
All DBs
Position
complement(2662497..2664164)
Genome browser
AA seq
555 aa
AA seq
DB search
MSILKRLKIAPKIFGGFGLVLLLLVSISILGFVTLTGIGSDFDRYRSIAIQSNEAGRVQA
NMLEARVGVRDYLLTGRQTAISTVLTRLQTASELNEKLGTLVDQGARKALIEETNDDLAD
YLQVFQSVVKIPAGDPQRDQLVIEGLDRIGPEVASNLENLKLEIRQEQDKLGPMVTEDIQ
NTIMLVTSISVAAVVCGIGAAWLIGTGISNPIRNITEAMTVLAAGDKQTPIPGQDHKDEI
GDMAKAVLVFKENMIRAEQLAAQEAEAQKRREARVKVIEKLTNDFDADMSLVLKSVSSAA
TEMQATASSMTATAEETNRQSTVVAAAAEQASNNVQTVASASEELSASISEISHQVNQSS
QVANKAVSEAENTNAQVRGLAEAAQKIGDVVGLISDIAAQTNLLALNATIEAARAGEAGK
GFAVVAAEVKNLANATSKATEEITAQITGIQAETEGAVVAIDSIGGTIAEISEIAATIAS
AVEQQGAATEEITRNVQQASAGTSEVTENIHGVNEAATSTGAAAEQVLNASGELSEQAET
LRLKVESFLTAVKAA
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atgtcaattttaaaaagacttaaaatagcgcctaaaatctttggtggcttcgggctcgtt
cttttgcttctggtgtcgatatccatactggggttcgtcacgttaaccgggataggtagc
gattttgatagataccgatctattgcaatacagtctaacgaggcaggccgggtacaggcc
aacatgctcgaagccagggttggcgttagggactatctgctgaccgggcggcagacagcc
atcagcactgtgcttacgcgtctgcaaacagcatctgaattgaatgaaaaactcggcacg
ctggttgatcagggtgcgcgaaaagccctgatcgaggaaacgaacgatgatttggctgac
tatcttcaagtctttcaatcagttgtcaaaattccggctggtgatcctcaaagagaccag
cttgttattgaaggtctggaccgtatcggtccagaggttgcatccaatcttgaaaacctg
aaacttgaaatcaggcaagagcaggataagctcgggccgatggttaccgaggatatccag
aataccatcatgcttgtgacgtcaatttcagttgctgcggtggtttgcggtattggtgct
gcttggctgattgggacgggaatatccaatcctatccggaatattacggaagccatgacg
gttcttgccgccggcgataaacaaacaccaatccccgggcaggatcataaggatgaaatc
ggcgatatggccaaagccgtgctggttttcaaagaaaacatgatccgggctgaacagctt
gccgcacaggaggccgaggcacaaaagcgaagagaagcccgcgtgaaagtcatcgagaag
cttaccaatgatttcgatgccgacatgtctctggtgctgaaaagcgtatcatctgcggca
acagaaatgcaggcaacagcttcatcgatgacagcaacggcagaagaaaccaatcgtcag
tcaactgtggttgcagcggcggctgaacaggcatccaacaatgttcaaaccgttgcgagt
gcatccgaggaattgagtgcttcgatttcggagatcagtcatcaggtcaatcaatcatcg
caagtcgcaaacaaggctgtttccgaggcggaaaataccaacgctcaggtccgcgggctt
gcggaagctgcccagaagattggtgatgtggtcgggttgattagcgatattgctgcgcag
accaaccttttggcattgaatgcaacgattgaagctgcgcgggcaggtgaggcagggaaa
ggttttgctgttgttgctgccgaggtcaaaaatctcgcaaacgcgacatcaaaagcaacc
gaagagattactgcccagatcacaggaattcaggcggaaacagaaggtgcggtggttgcg
attgactctattggcggtacgattgctgagatcagcgaaattgcagcaacgattgcaagt
gctgtggaacagcagggggctgccaccgaagaaatcacccgaaatgttcagcaggcgtca
gccggaacaagcgaggtaaccgaaaacattcatggtgttaacgaggcggcgacatcaacc
ggtgccgctgccgagcaagtgttgaatgcatcgggtgagctgtctgagcaggcagaaacc
ttgcgtctgaaagttgaatctttcctgacagcggtcaaggcagcttaa
DBGET
integrated database retrieval system
