Thalassospira sp. B30-1: IT971_16960
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Entry
IT971_16960 CDS
T11046
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
thad Thalassospira sp. B30-1
Pathway
thad03420
Nucleotide excision repair
thad03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
thad00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
IT971_16960
03430 Mismatch repair
IT971_16960
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
thad03400
]
IT971_16960
Enzymes [BR:
thad01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
IT971_16960
DNA repair and recombination proteins [BR:
thad03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
IT971_16960
MMR (mismatch excision repair)
Other MMR factors
IT971_16960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_30
UvrD_C_2
PcrA_UvrD_tudor
AAA_11
AAA_12
AAA_22
vATP-synt_AC39
AAA_16
Motif
Other DBs
NCBI-ProteinID:
QPL38118
LinkDB
All DBs
Position
complement(3594049..3596406)
Genome browser
AA seq
785 aa
AA seq
DB search
MDDPFEIDEFAASPEMRLQDAPAPDYLANLNAEQREAVETLDGPLLVLAGAGTGKTRVLT
TRLAHLLETKGQTERLHPQQILAVTFTNRAAKEMQERVAHALGRPVEGWWLGTFHSLAAR
LLRRHAELVGLQSNFTILDSDDQVRLLKQIMDAEQIDQKKWPAKQLMGIIQRWKDKGLSP
ERVNESVEFANGGAKYLYKIYQERLAVLNAADFGDLLLHCLTLFQKHPEILRRYQETFRY
VLVDEYQDTNVAQYLWLRALAMVHRNICCVGDDDQAIYSWRGAEVGNILRFESDFPGAKV
VRLEQNYRSTPHILAAASKLITFNDGRLGKELWTELDTGEKVFVKGVWDGEAEARLVGED
IEALQSRGIGASQMAILVRAGFQTREFEERLITLGIPYRVVGGPRFYERQEIRDALAYIR
MVAQPDDSLAFERIVNVPKRGVGKATLQTLHQYSRDQAVSLPAAALDLIGTEELKPKMRQ
AIGGLLGDFKRWREMLETTSHVAVLETVLDESGYTDMWRTSKEIDAPGRLENLKELVSAI
GEFENLTSFLEHVSLVMENEQNADQEKVTIMTLHAAKGLEFDYVFLPGWEEGVFPHQRAM
DESGVKGLEEERRLAYVGITRARKRATVSYAANRRIYNQWQSALPSRFVDELPDEHVERI
SDTGLGNHRGNVSPGAWGADDWMKMPSWADNKPAESYNPYGGTGERRFASAGWQDRVRKN
VIDVKPDGETSYTTSSKSSKYKVGDAVRHRKFGPGTVKAVDGNKLEIHFEGVGTKKVVDS
FILPG
NT seq
2358 nt
NT seq
+upstream
nt +downstream
nt
atggatgatccctttgaaatcgatgaattcgccgcaagcccggaaatgcgccttcaggac
gcacccgcaccggattaccttgccaatctgaatgccgagcaacgcgaagcagtcgaaacg
cttgatggcccgttgctggtgctggcaggtgccgggaccgggaaaacgcgcgttctgacg
acccgccttgcccatctgctggaaaccaagggacagacggagcgcctgcatccgcagcaa
atccttgccgtgacctttaccaaccgtgcggccaaggaaatgcaggaacgtgttgcccat
gcgctgggccgtccggttgaaggatggtggctggggactttccactcgctggccgcccgc
ctgttgcgccgtcatgccgaactggtcgggttgcaatcaaacttcacgatccttgatagc
gacgatcaggtccgcctgctcaagcagatcatggatgccgaacagatcgatcagaaaaaa
tggcccgccaagcagctgatgggcatcatccagcgctggaaggacaaggggctttcaccc
gaacgggtcaatgaaagtgtcgagttcgccaatggcggggccaagtacctttataaaatc
tatcaggaacgccttgcggttctgaatgcggccgatttcggcgatcttttgctgcattgc
ctgaccctgttccagaaacatccggaaatcctgcgccgctatcaggaaaccttccgctat
gttctggtcgatgaatatcaggataccaacgtggcccaatatctttggctgcgtgcgctg
gcgatggttcatcgcaatatctgctgtgtcggtgatgacgatcaggcgatctatagctgg
cgcggggccgaggtcggcaacatcctgcgtttcgagtccgatttccccggggccaaggtc
gtccggctggaacagaattatcgttccacgccccatattctggcggcggcgtccaagctg
atcacctttaacgatggtcgtctgggcaaggagctttggaccgaacttgataccggcgaa
aaggtctttgtcaaaggtgtctgggatggcgaggcagaggcgcggcttgtcggcgaggat
atcgaagccctgcaaagccgtggcatcggtgcatcccagatggcgatccttgttcgcgcc
gggttccagacccgcgagtttgaggaacggctgattacattgggcatcccgtaccgggtt
gtcggcggaccgcgtttctatgaacgtcaggaaatccgcgatgcgctggcttatatccgc
atggtcgcccaacctgatgacagccttgcgtttgaacgcatcgtcaatgtgcccaagcgc
ggggtggggaaggccaccttgcaaaccctgcatcaatattcgcgtgatcaggccgtgtcg
cttccggcggcggcccttgatctgatcgggaccgaggaactcaaacccaaaatgcgtcag
gcgattggcgggttgctgggtgatttcaaacgctggcgcgagatgcttgaaaccacatcg
catgtggcggtgcttgaaacggttcttgatgaaagcggctataccgatatgtggcggaca
tcgaaggaaatcgatgcgccgggccgtctcgaaaaccttaaagaactggtatccgcaatt
ggcgagtttgaaaacctgaccagcttccttgaacatgtgtcgctggtgatggaaaacgaa
cagaacgccgatcaggaaaaagtcaccatcatgaccctgcatgcggcaaaggggctggaa
tttgactatgtcttcctgcccggttgggaagagggcgttttcccccatcagcgcgccatg
gatgaaagcggcgtcaagggacttgaggaagaacgtcgtctggcctatgtcggcatcacg
cgtgcgcgcaaacgtgccacggtttcctatgccgccaaccggcggatttataaccagtgg
caatcggccctgccgtcgcgctttgtcgatgaattgcccgacgagcatgtcgaacgcatc
agcgataccggccttggcaatcatcgcggcaatgtatcgccgggtgcatggggggccgat
gactggatgaaaatgccaagctgggcggataacaaaccggcggaaagctataacccctat
ggcgggaccggcgaacgccggtttgccagcgcaggctggcaggaccgggtgcgcaaaaac
gtgatcgacgtcaagccggacggtgaaaccagctacacaaccagttcgaaatcatcgaaa
tacaaggttggtgatgcggtacgtcatcgcaaattcggccccggcaccgtcaaggcggtc
gatggcaacaagcttgaaattcatttcgaaggtgtcggcacaaagaaagtggtcgacagt
ttcatcctgccgggttaa
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