Thalassospira sp. B30-1: IT971_17040
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Entry
IT971_17040 CDS
T11046
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
thad Thalassospira sp. B30-1
Pathway
thad03030
DNA replication
thad03430
Mismatch repair
thad03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
thad00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
IT971_17040
03430 Mismatch repair
IT971_17040
03440 Homologous recombination
IT971_17040
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
thad03032
]
IT971_17040
03400 DNA repair and recombination proteins [BR:
thad03400
]
IT971_17040
Enzymes [BR:
thad01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
IT971_17040
DNA replication proteins [BR:
thad03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
IT971_17040
DNA repair and recombination proteins [BR:
thad03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
IT971_17040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
CAF1
Motif
Other DBs
NCBI-ProteinID:
QPL34820
LinkDB
All DBs
Position
3615907..3616596
Genome browser
AA seq
229 aa
AA seq
DB search
MGLRQKIVDSDFYRQMVQRRATGPLRSYYDIPAADPDTPIRNVEFVALDLETTGLDPKHD
EIVSIGLVIIRQLAVDFSSCQHLLVRPKKELSESSVIVHRIFDSDVEQAPDIEIALAHIL
PILAGRVLVAHHAPIELGFLGHACKRYFGASLQIPTVDTLVLALRDLHRQGQPMKSGALK
LETLRHTHNLPPYRIHNALSDAIAASGLFLAQIAKRDPKGELELRRVLR
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
atgggcctgcgtcagaaaatcgtcgatagcgacttttaccgccagatggtgcaacgccgg
gcgaccgggccgcttcgttcctattacgacatccccgccgccgatcccgatacgccgatc
cggaatgtcgaatttgtcgcccttgatctggaaaccaccggtcttgatccgaaacacgat
gaaatcgtctcgattggcttggtgatcattcgtcagctcgcagttgatttttcaagctgt
cagcatcttctggtgcggccgaaaaaggaactcagcgaaagctcggtaatcgtgcaccgc
attttcgacagcgacgtcgaacaggcccccgatatcgagatcgcgctggcccatatcctg
cccattctggccgggcgggttctggtggcccatcacgcgccgatcgagctcggtttcctt
ggtcatgcctgcaaacgttactttggtgcatctttgcagattccgaccgtcgataccctg
gtgctggctcttcgtgatctgcaccggcagggacaaccgatgaaatcgggcgcgctgaaa
cttgaaacgctgcgccatacccataatctgccaccctatcgtattcacaatgccctgtcg
gatgcgattgccgcgtcgggcctgtttctggcgcagattgccaagcgtgatccgaaaggc
gaacttgagcttcgccgcgtgctgcgttaa
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