Thalassospira sp. B30-1: IT971_18135
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Entry
IT971_18135 CDS
T11046
Name
(GenBank) extracellular solute-binding protein
KO
K11069
spermidine/putrescine transport system substrate-binding protein
Organism
thad Thalassospira sp. B30-1
Pathway
thad02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
thad00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
IT971_18135
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
thad02000
]
IT971_18135
Transporters [BR:
thad02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Spermidine/putrescine transporter
IT971_18135
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_6
SBP_bac_1
SBP_bac_11
Lipoprotein_8
Motif
Other DBs
NCBI-ProteinID:
QPL35017
LinkDB
All DBs
Position
complement(3858854..3859894)
Genome browser
AA seq
346 aa
AA seq
DB search
MNIRSVLLGASALALLSAGAAKADGELFLYNWSNYFPPELIEKFEADTGIKVTLDVYDSN
ETMLAKLQAGASGYDIAVASDYMVDTMIKDGLATEFDAKSLENFKNVAKPHDTMQYDPDR
KYSVTYLWGTTGFTYDAAGTDAEIEQSWKEFFEPREEFQGKIGALNDEVEMYNAASYYIG
VKKCTEDPAEAQKVLDVLLKQKPYIAVYSSEGTIDRMSAREVQMHMQWNGAAHRTKETIP
EAVFVYPKEGLTYWSDHFVVPTGAPNLENAKTFINWMMQPENAAAASNYAGYMNGIRGAD
AFMDESLKNDPAVNMPEEYADLLIPGQNCSAKARDLRNRVWTKLKN
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atgaacatacgttctgtacttctgggagcatcggcacttgcgttgttgtctgccggggcg
gcgaaggccgacggcgagttgttcctgtataactggtcgaactattttccgccggaactg
attgaaaagttcgaagccgataccgggatcaaggtgacgcttgatgtctatgattccaat
gaaaccatgctggcgaaattgcaggctggggcatcgggatatgatatcgcggtggcatcg
gactatatggtcgacaccatgatcaaagacgggcttgcgaccgaatttgacgctaagagc
cttgaaaacttcaagaatgtcgccaaaccgcatgacacgatgcaatacgacccggaccgg
aaatattcggtgacctatttgtggggcaccaccggctttacctacgacgcggctgggact
gatgccgagatagagcaaagctggaaagagtttttcgagccgcgcgaagagtttcagggc
aagatcggcgcgctgaatgacgaagtcgaaatgtataatgcggcgtcgtattatatcggg
gtcaaaaaatgcacggaagacccggccgaggcgcaaaaggttctcgacgtgttgctgaaa
caaaaaccctatattgcggtttacagctctgaaggcacgattgaccgcatgtcggcccgc
gaagtgcagatgcatatgcagtggaacggggcggcacaccgaaccaaggaaaccattccc
gaggcagtgtttgtgtatcccaaagaaggcctgacttattggtcggatcatttcgtcgtg
ccgactggtgcgccgaaccttgagaatgcgaaaacctttatcaactggatgatgcagccg
gaaaacgccgccgccgcgtcgaactatgccggttacatgaacgggatcaggggcgcagac
gccttcatggatgagtcgctgaaaaatgatccggcggtcaatatgcccgaagaatatgcc
gaccttctgataccggggcagaattgctcggccaaggcgcgcgatttgcgcaaccgtgtc
tggaccaagctcaagaactag
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integrated database retrieval system
