Thalassospira sp. B30-1: IT971_20280
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Entry
IT971_20280 CDS
T11046
Name
(GenBank) phenylalanine--tRNA ligase subunit beta
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
thad Thalassospira sp. B30-1
Pathway
thad00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
thad00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
IT971_20280
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
thad01007
]
IT971_20280
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
thad03016
]
IT971_20280
Enzymes [BR:
thad01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
IT971_20280
Amino acid related enzymes [BR:
thad01007
]
Aminoacyl-tRNA synthetase
Class II (U)
IT971_20280
Transfer RNA biogenesis [BR:
thad03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
IT971_20280
Prokaryotic type
IT971_20280
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B3_4
tRNA_synthFbeta
FDX-ACB
tRNA_bind
B5
HTH_30
Motif
Other DBs
NCBI-ProteinID:
QPL35406
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All DBs
Position
complement(4361941..4364349)
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AA seq
802 aa
AA seq
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MKFTLDWLKQHLDTDASIDVIAEKLTDVGLEIESVTDRAAALRDIRVAYIEEAGQHPDAD
RLKLCRVNTGDKIIQVVCGAPNARTGIKVALAQPGAIIPIDGSKLKPGKIRGVESQGMMC
STRELCLGEDHDGIIELPEDAEIGAQVATVLGADDPIIEIGLTPNRPDCTGVRGIARDLA
AAGLGALKADPRQEAVAGSFDSPVGVTISADIAKNAAAPAFYGRYIRGVKNGESPAWLKA
RLEAIGLRPISALVDITNLVTHDLARPLHVFDADKLSGDINVRYAINGEKLAALDNREYE
LSESMVVIADQAKALGIGGIIGGEETGCVEDTVNVFVECALFDPISVAKTGRKLQINSDA
RYRFERGVDPQSIVWGMEVATRLITELCGGEVSHVVKAGDVPAPRNSFDLRIDRIRELGG
VDVDADQAIAILKSLGFEVTGNAPVITAVAPTWRPDIVGEADLVEEVLRIVGYDKIPTVP
LERETSLPVPALSPFQKRVGLTRRTLASRGMFETVTWSFTDSRWAKLFADLKPGLFLANP
ISSDLDVMRPNVLINLIAAVGRNQSRGFADLALFEAGPEFFGDQPGDQRLVAAGLRSGST
TPRSWTGSRRDIDLFDVKADAEALLEALGTAAANVQVNADGAPSWYHPGRSAALQLGPKN
ILGYFGELHPKVLKALGVKGRVVAFELFVENVPMPKKKGPGRPLLNASSFQSVERDFAFL
LDADVQSEAIVKAARNVDRNLISDVTIFDLYAGKGIEDGKKSIAFSITLQPTKATLTEEE
IDGVCKKVVAAVEKATGGSLRA
NT seq
2409 nt
NT seq
+upstream
nt +downstream
nt
atgaaattcacactcgattggctgaagcagcacctcgataccgatgcgtcgattgatgtt
atcgccgaaaaactgaccgatgtcgggcttgaaatcgaaagcgtcaccgaccgagccgca
gcgcttcgggatatccgtgtcgcctatatcgaagaagcgggtcagcacccggatgccgac
cgcctgaaactgtgccgggtgaataccggtgataaaatcattcaggtcgtttgcggtgca
ccgaacgcccgaaccgggatcaaggttgcactggcacagccgggcgcgatcatcccgatt
gacggttcgaaactgaaaccgggtaaaatccggggcgtcgaaagccagggcatgatgtgt
tcgacccgcgaactttgcctgggtgaagatcacgacggcatcatcgaactgccggaagat
gccgaaatcggcgcacaggttgcaacggttcttggtgcggacgatccgatcattgaaatc
ggcctgaccccgaaccgtcccgattgtaccggtgtgcgcgggatcgcacgtgatcttgcc
gctgccggtcttggggcgctaaaggcagatccacgtcaggaagcggttgccggatcgttc
gatagcccggtgggtgtcacgatttcagcagatattgcaaaaaatgccgcagccccggca
ttttatggtcgctacattcgcggtgttaaaaacggcgaaagcccggcatggctgaaagcc
cgtcttgaagccatcggtttgcgtccgatttcggctcttgtcgatatcacaaaccttgtg
acccatgaccttgcccgtccattgcatgtatttgatgccgataaactgtcgggtgacatc
aatgtgcgctatgcgatcaatggcgaaaagcttgcggcacttgataacagggaatacgag
ctgtccgagagcatggtcgtgattgccgatcaggcaaaggcacttggcatcggtggtatt
atcggcggtgaagaaaccggttgtgtcgaagacacggtcaatgtgtttgtcgaatgtgcc
ctgttcgatccgatcagtgttgcaaaaaccggtcgcaaactgcagatcaattccgatgcc
cgttaccggttcgagcgcggcgttgatccgcaatcaattgtctggggcatggaagttgcc
acccgtctgatcacggaactttgtggtggcgaagtttcgcacgtggtcaaggccggtgac
gttcctgcgcccaggaacagctttgatcttcgcattgatcgcatccgggaactggggggt
gtcgacgttgacgccgatcaggcgattgcaattctgaagtcgcttggcttcgaagttacc
ggaaatgcgcccgttattacggctgttgcaccaacatggcgtccggatatcgttggcgaa
gccgatctggtcgaggaagtgctgcgcattgtcggatacgataaaataccgacggtgccg
ctggaacgtgaaaccagcctgccggttccggcccttagcccgttccagaagcgggtcggt
ctgacccgtcggacactggcttcgcgcggcatgtttgaaaccgtcacgtggtcgttcacg
gactcgcgttgggcaaaactgtttgcggatttgaaaccggggctgttccttgccaatccg
atcagttccgatcttgatgtgatgcggcccaatgtgctgatcaacctgattgccgcagtc
ggtcgcaatcagtcgcgcggctttgctgatctggcactgtttgaagctggtccggaattc
tttggcgatcagccgggggatcagcgtctggttgcggccggtttgcggtcgggatcgact
actccgcgcagctggacagggtcccgtcgcgatattgacctgtttgatgtcaaggcggat
gccgaggcattgctggaagcccttggtactgccgcagccaacgtgcaggtgaatgctgat
ggtgccccgtcgtggtatcacccgggccgatcagccgccttgcagctggggccgaaaaac
atccttggctatttcggtgaactgcacccgaaagtattgaaagctttgggtgtcaaaggg
cgcgtcgttgcgttcgagctgttcgttgaaaacgttccgatgccaaagaaaaaaggcccc
ggccgcccgttactgaatgcatcaagcttccagtcggtcgaacgtgattttgccttcctt
ctggatgcggatgttcagtccgaagccattgtcaaggcagcacggaatgtggaccgtaac
ctgatttcggatgtcacgatcttcgatctttatgccggcaaaggtatcgaggatggcaag
aaatcaattgctttctcgatcaccttgcagccgaccaaggcaaccctgaccgaagaagaa
atcgacggggtttgtaaaaaggttgtcgctgctgtcgaaaaggcaacaggcggttctttg
cgcgcctag
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