Thalassospira sp. B30-1: IT971_22260
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Entry
IT971_22260 CDS
T11046
Symbol
rpsA
Name
(GenBank) 30S ribosomal protein S1
KO
K02945
small subunit ribosomal protein S1
Organism
thad Thalassospira sp. B30-1
Pathway
thad03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
thad00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
IT971_22260 (rpsA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
thad03011
]
IT971_22260 (rpsA)
Ribosome [BR:
thad03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
IT971_22260 (rpsA)
Bacteria
IT971_22260 (rpsA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
S1_RRP5
Spt6_S1
S1_2
S1CSD-TOTE-1
RNase_II_C_S1
MRP-S35
Motif
Other DBs
NCBI-ProteinID:
QPL35765
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Position
4777376..4779079
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AA seq
567 aa
AA seq
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MTTAEQAQFSTGEDFAALLAESLGSEDEGFIGRVMTGTVVKTTDDDAIVDVGLKSEGRVP
LKEFGAGDVNIGDTVDVYVDRYENKDGLIVLSREKARREEAWVELEKQFNEGKRVDGTIF
GRVKGGFTVDLSGAVAFLPGSQVDIRPVRDVTPLMNNPQPFQILKMDRSRGNIVVSRRAV
LEETRAEQRAELIQNLQEGQVLDGVVKNITDYGAFVDLGGVDGLLHVTDIAWKRINHPSE
ALQIGQTVKVQVIRFNSETQRISLGMKQLEADPWEGVEAKYPVGSKFEGRVTNITDYGAF
VELEAGVEGLVHVSEMSWTKKNIHPGKIVSTSQEVEVMVLDVDAQKRRISLGLKQCTSNP
WDAFLAAHPVESEIEGEVKNITEFGLFIGLLGGIDGMAHLSDLSWDRAGEEVIKEYKKGD
IVKAKVLDVDVEKERISLGIKQLSGDPFKEAVTGIKRGETVTCEITEVNDGGIEVAVGGT
DLKGFIRKAELARDRSDQRPERFAVGEKVDARVTTIDAKTRKVTLSVKALEVADEKKAMA
DYGSADSGASLGDILGEALRKKQEGAE
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atgacaaccgctgaacaagcacaattctccaccggcgaagatttcgccgccctgctggcc
gaaagcctcggttctgaagacgagggctttattggccgcgtgatgaccggtacggtcgtc
aaaaccaccgacgacgatgcaatcgtcgacgtgggtctgaagtccgaaggccgcgtgccg
cttaaagaatttggcgcaggcgacgttaatatcggcgataccgttgatgtttatgtcgat
cgctatgaaaacaaagatggcctgatcgttctgtcgcgcgaaaaagcgcgtcgcgaagaa
gcctgggtcgagctggaaaaacagttcaacgaaggcaaacgcgtcgacggtaccatcttt
ggtcgtgttaaaggcggcttcactgtcgacctgtcgggcgccgtggcattcctgccgggc
agccaggttgacatccgtccggttcgcgacgttaccccgctgatgaacaacccgcagccg
ttccagatcctgaaaatggatcgttcgcgcggtaacatcgtggtttcgcgtcgtgccgtt
ctcgaagagacccgtgctgaacagcgcgccgaactgatccagaacctccaggaaggtcag
gttcttgacggtgttgtcaaaaacatcaccgattacggcgcattcgtcgatctcggcggt
gttgacggcctgctgcacgtcaccgacatcgcatggaagcgtatcaaccatccgtctgaa
gcccttcagatcggtcagaccgtcaaggtccaggttatccgcttcaacagcgaaacccag
cgtatctcgcttggcatgaaacagcttgaagctgacccgtgggaaggtgtcgaagccaaa
tacccggtcggttcgaaattcgaaggccgtgtcaccaacatcaccgattacggcgcattc
gtcgaactcgaagctggtgtcgaaggtctggtccacgtttccgaaatgtcctggaccaag
aaaaacatccacccgggcaaaatcgtttcgacctcgcaggaagtcgaagtcatggtgctc
gacgtcgatgcacagaaacgccgtatttcgcttggtctcaagcagtgcacctcgaacccg
tgggatgccttcttggccgctcatccggtcgagtccgagatcgaaggcgaagtcaagaac
atcaccgaattcggtctgttcattggccttctgggcggtatcgacggtatggcgcacctc
tcggacctgtcatgggaccgcgctggtgaagaagtcatcaaagaatacaaaaaaggtgac
atcgtcaaagccaaggttcttgacgttgacgtcgagaaagaacgcatctcgcttggtatc
aaacagctttcgggtgacccgttcaaagaagccgttaccggcatcaaacgcggcgaaacc
gtaacctgtgaaatcaccgaagttaacgatggtggtatcgaggttgctgttggtggcacc
gatcttaaaggcttcatccgcaaggctgaactcgcacgtgaccgttcggaccagcgtccg
gaacgtttcgcagttggcgagaaagtcgatgcgcgtgtgaccacgatcgacgccaaaacc
cgcaaggttaccctctcggtcaaagctcttgaagttgctgacgagaagaaagccatggcg
gattatggttcggctgacagcggtgcatcgcttggtgatatccttggcgaagcacttcgc
aagaaacaggaaggtgccgaataa
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