Thalassospira sp. B30-1: IT971_22275
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Entry
IT971_22275 CDS
T11046
Symbol
ihfB
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
thad Thalassospira sp. B30-1
Brite
KEGG Orthology (KO) [BR:
thad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
thad03032
]
IT971_22275 (ihfB)
03036 Chromosome and associated proteins [BR:
thad03036
]
IT971_22275 (ihfB)
03400 DNA repair and recombination proteins [BR:
thad03400
]
IT971_22275 (ihfB)
DNA replication proteins [BR:
thad03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
IT971_22275 (ihfB)
Chromosome and associated proteins [BR:
thad03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
IT971_22275 (ihfB)
DNA repair and recombination proteins [BR:
thad03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
IT971_22275 (ihfB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_1
HD_assoc_2
TPPII
HU-CCDC81_euk_2
HU-CCDC81_bac_2
NNH1
Motif
Other DBs
NCBI-ProteinID:
QPL35768
LinkDB
All DBs
Position
4781860..4782135
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AA seq
91 aa
AA seq
DB search
MTKSELIARLAEMNPHLYQRDVERIVATIFDEITEALARGDRVELRGFGAFSVKQRDSRV
GRNPRTGEAVPVGEKKVPYFKTGKQLRERLN
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaatcagaactgatcgcccggctggccgagatgaacccgcatctgtatcagcgc
gatgtggaacggatcgtggcgacgatctttgacgaaattaccgaggctctggcacgcggg
gatcgggttgagctgcgcggcttcggcgcattttccgtgaaacagcgtgattcccgggtc
ggacgcaatccgcgtaccggtgaggctgtgcctgtgggcgagaaaaaggttccttatttc
aaaaccgggaagcagctgcgcgagcgtcttaactga
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integrated database retrieval system
