Terasakiella halodenitrificans: ACNI26_01195
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Entry
ACNI26_01195 CDS
T12017
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
thaf Terasakiella halodenitrificans
Pathway
thaf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
thaf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACNI26_01195 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
thaf03021
]
ACNI26_01195 (rho)
03019 Messenger RNA biogenesis [BR:
thaf03019
]
ACNI26_01195 (rho)
Transcription machinery [BR:
thaf03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
ACNI26_01195 (rho)
Messenger RNA biogenesis [BR:
thaf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
ACNI26_01195 (rho)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
OB_RNB
AAA_25
NACHT
S1CSD-TOTE-2
AAA_22
AAA
Fungal_virus_P2_C
Motif
Other DBs
NCBI-ProteinID:
XPV56954
LinkDB
All DBs
Position
complement(247029..248288)
Genome browser
AA seq
419 aa
AA seq
DB search
MNLQELKEKSPADLLAYAEELEIENAGNMRKQELMFAILKTLAENDITIYGGGVLEVLQD
GFGFLRSPEANYLPGPDDIYVSPNQVRKFSLRTGDTVEGQIRAPKDGERYFALLKVENIN
FEEAAKARHRVHFDNLTPLYPDERLKMEIEDPEKKDYTPRVIDLVSPIGKGQRALLVAPP
RTGKTVMLQNIAHSIAKNHPECYLIVLLIDERPEEVTDMDRSVKGEVISSTFDEPATRHV
QVAEMVISKAKRLVEHKKDVVILLDSITRLARAYNTCVPSSGKVLTGGVDANALQRPKRF
FGAARNIEEGGSLTIISTALIDTGSRMDEVIFEEFKGTGNSEIVMDRKLADKRTFPAIDI
TKSGTRKEDLLVEKDTLSKMWVLRRILDPMGTADGMEFLLDKLRYSKNNDDFFDSMNSR
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttcaggaacttaaagaaaaatcccctgctgaccttttagcttatgctgaagag
ttggaaattgaaaatgccggcaatatgcgcaaacaagaattgatgtttgccattttgaag
accttggctgaaaatgacatcacgatttatggtggtggcgttttggaagtgttgcaagat
ggtttcggctttttgcgttcaccagaagccaattatctgccgggaccggacgatatttat
gtgagccctaatcaggttcgtaaattttcgttgcgcacaggcgatacagttgaaggccag
atccgggcgcccaaagatggcgaacgttattttgccctgttaaaagttgaaaatatcaac
tttgaagaagcggcaaaagctcgtcaccgcgtccattttgataaccttacgccactttac
ccggatgagcgtttgaaaatggaaattgaggatccagaaaagaaagattacaccccgcgt
gtgattgatctggtttccccaattggtaaaggacagcgcgctcttttggttgcgccgcca
cgtaccggtaagaccgtgatgttgcaaaatatcgcgcattccatcgcgaaaaatcatccg
gaatgttatttgattgttctcttgattgatgaacgcccggaagaagtaacagatatggat
cgttctgtgaaaggggaggttatttcctcgacattcgatgaaccggcaacgcgtcacgtt
caagtcgctgaaatggtgatttccaaggccaaacgtttggtggaacataaaaaggatgtg
gtcattctgttggattccatcacccgattggcgcgtgcctataacacctgtgtaccgtca
tccggtaaggttttaacaggtggtgtggatgcaaacgctctgcaacgtccaaaacgtttt
tttggggcggcgcgtaatatcgaagaaggtggttctctgaccattatttctacggccctg
atcgatacaggttcgcgtatggatgaagtgatctttgaagaatttaaagggacaggtaac
tccgagattgtgatggatcgcaaacttgccgacaaacggaccttcccggcaattgatatc
acgaaatccggtacccgtaaggaagacttactggtggaaaaagacaccctgtccaaaatg
tgggttctgcgtcgtattctggacccgatgggcacagcagacggtatggaattcctgctg
gataagttacgttattccaaaaacaacgatgatttcttcgattcgatgaattctcgttaa
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