Thauera sp. GDN1: CKCBHOJB_00298
Help
Entry
CKCBHOJB_00298 CDS
T09925
Symbol
polC_1
Name
(GenBank) DNA polymerase III PolC-type
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
thag
Thauera sp. GDN1
Pathway
thag03030
DNA replication
thag03430
Mismatch repair
thag03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
thag00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CKCBHOJB_00298 (polC_1)
03430 Mismatch repair
CKCBHOJB_00298 (polC_1)
03440 Homologous recombination
CKCBHOJB_00298 (polC_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
thag03032
]
CKCBHOJB_00298 (polC_1)
03400 DNA repair and recombination proteins [BR:
thag03400
]
CKCBHOJB_00298 (polC_1)
Enzymes [BR:
thag01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CKCBHOJB_00298 (polC_1)
DNA replication proteins [BR:
thag03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CKCBHOJB_00298 (polC_1)
DNA repair and recombination proteins [BR:
thag03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CKCBHOJB_00298 (polC_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
WEN40765
LinkDB
All DBs
Position
322439..323206
Genome browser
AA seq
255 aa
AA seq
DB search
MLHLGDLKKTPSGARGRRRAAETVPDWPARFAELAACVRDPRLRAFYAAGVLAGDTALHE
VPLVALDVETTGLDPARDEIVSIGLVPMSTRCIRSSASRYWVVRPRAELQPESVTIHAIT
HAQIETAPDLGAILGELLPALAGRVVVVHCREIERRFLDVALKARLGEGIEFPVIDTMEL
EARLHRQLPRGFLARLFGRQPTPVSIRLADSRERYCLPRYRAHHALTDALATAELLQAQL
AHRFSPETPLRELWL
NT seq
768 nt
NT seq
+upstream
nt +downstream
nt
gtgctgcacctcggagacctgaagaagacgccgtcgggcgcgcgcggccggagacgcgcc
gcggagaccgtgcccgactggccggcgcgcttcgccgagctcgccgcctgcgtgcgcgat
ccgcgcctgcgcgccttctacgctgccggcgtgctcgccggcgacaccgcgctgcatgag
gtgccgctggtggcgctcgacgtcgagaccaccgggctcgatcccgcgcgcgacgagatc
gtcagcatcggcctggtgccgatgagcacccgctgcattcgttccagtgcgtcgcgctac
tgggtggtgcgtccgcgcgccgagctgcagcccgagtcggtgacgatccacgccatcacc
catgcgcagatcgagaccgcgccggatctcggcgccatcctcggcgaactgctgccggca
ctggccgggcgggtggtggtggtgcattgccgcgagatcgagcgccgatttctggatgtg
gcgctgaaggcgcgcctgggcgaggggatcgagtttccggtgatcgacaccatggagctc
gaggcgcgcctgcaccgccagctgccgcggggtttcctggcgcggcttttcggccgccag
ccgacgcccgtgtcgatccgtctcgccgacagccgcgaacgctactgcctgccgcgctac
cgcgcgcatcacgcgctcaccgatgcgctcgccaccgccgagctgctgcaggcgcagctg
gcgcaccggttttcgccggagacgccgctgcgcgagctgtggctgtga
DBGET
integrated database retrieval system
