Thauera sp. GDN1: CKCBHOJB_00333
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Entry
CKCBHOJB_00333 CDS
T09925
Symbol
nifJ
Name
(GenBank) Pyruvate-flavodoxin oxidoreductase
KO
K03737
pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:
1.2.7.1
1.2.7.-]
Organism
thag
Thauera sp. GDN1
Pathway
thag00010
Glycolysis / Gluconeogenesis
thag00020
Citrate cycle (TCA cycle)
thag00620
Pyruvate metabolism
thag00650
Butanoate metabolism
thag00720
Other carbon fixation pathways
thag01100
Metabolic pathways
thag01110
Biosynthesis of secondary metabolites
thag01120
Microbial metabolism in diverse environments
thag01200
Carbon metabolism
thag01210
2-Oxocarboxylic acid metabolism
Module
thag_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
thag00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
CKCBHOJB_00333 (nifJ)
00020 Citrate cycle (TCA cycle)
CKCBHOJB_00333 (nifJ)
00620 Pyruvate metabolism
CKCBHOJB_00333 (nifJ)
00650 Butanoate metabolism
CKCBHOJB_00333 (nifJ)
09102 Energy metabolism
00720 Other carbon fixation pathways
CKCBHOJB_00333 (nifJ)
Enzymes [BR:
thag01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.7 With an iron-sulfur protein as acceptor
1.2.7.1 pyruvate synthase (ferredoxin)
CKCBHOJB_00333 (nifJ)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
POR_N
POR
EKR
PFOR_II
Fer4
Fer4_16
Fer4_7
Fer4_6
Fer4_9
Fer4_21
TPP_enzyme_C
Fer4_10
Fer4_2
Fer4_8
LdpA_Fe-S-bd
Fer4_18
Fer4_4
EutN_CcmL
Transketolase_C
Fer4_3
Motif
Other DBs
NCBI-ProteinID:
WEN40800
LinkDB
All DBs
Position
complement(362341..366012)
Genome browser
AA seq
1223 aa
AA seq
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MKPMITIDGNEAAASVAFRASEVIAIYPITPSSNMGELADEWAAHGKANIWGSVPRVVEM
QSEGGAAGAVHGALQAGALATTFTASQGLLLMIPNMYKIAGELTPTVFHVAARALATHAL
SIFGDHSDVMSTRATGFALLASNSVQEAHDFAAIATAATLAGRVPVLHFFDGFRTSHEVS
KIDFIPDEVLHALLPDARIAAQRARALSPEHPVIRGTSQNPDVFFQAREAQNPWFDAFPA
VVQQAMDEFAALTGRRYTLFDYVGAPDAERVIVIMGSGADTVEETVAHLNARGDKVGVLK
VRLFRPFAPAALLAALPQSVRSLAVLDRCKEPGADGEPLFKDVMVALAEDQAGAAPRFAA
MPKVIGGRYGLGSKEFNPAMVCAIFAELQQAAPRRRFTIGIEDDVTGLSLPWDRAFRTDA
TASAFAAVFYGLGSDGTVSANKNSIKIIGDETALFAQGYFVYDSKKSGAMTVSHLRFGPQ
PIRSAYLTGAGDAKFVACHQPLFIAQHDLLAHAAPGAVFLLNASEPADKVWAALPPTMQR
TMVEKKISFWVIDAYQVALEAGMGRRINTVMQTCFFAISGILPQDQAIAAIKRAVEKTYG
RKGRRIAEQNYRAIDATVAALQRVAVPETLAALDAVTGEAPITAAGLDAFTRRVTIPLIQ
GKGDALPVSLLPVDGTWPTGTARHEKRNLALEIPVWDEKLCTQCGKCVFVCPHSAIRAKV
FPAERVADAPAAFKHVPARSKDYAAGTHMSYQVAPEDCTGCTLCVDVCPIRDKSNVSHKA
LNMAPQPPLRAQEAENWDYFLRLPDLARRDAKRSTIPGSMLLQPLFEFSGACVGCGETPY
IRLATQLFGDRMMVANATGCSSIYGGNLPTTPYTTDADGRGPAWNNSLFEDNAEFGLGMR
LATDQLAAAARTQLQALAATQGEALGNELVAALLDADQHSEAGIHEQRERVALLKQKLAT
IDTPAARQLAALSEYLIRRSVWIIGGDGWAYDIGFGGLDHVLASGEDVNILVLDTEVYSN
TGGQNSKATPMGAVAKFAAGGKPAHKKDLAKIAMDYENVFVAKVAYGAKDVHTLKAFLDA
EGYPGVSIIIAYSPCIAHGVDMSFNLHQQDLAVKSGHWPLLRYDPRLRAQGRNPLSVDSA
APSVPYRDFARNEARFTVLERQNPEASERFLDEAERHARHRHHEYVELAALPGVDETEPK
DAATDGAAQDAAPAARTGDTQNG
NT seq
3672 nt
NT seq
+upstream
nt +downstream
nt
atgaagccgatgatcaccatcgacggcaacgaggccgccgcctcagttgccttccgcgca
tccgaagtgatcgcgatctacccgatcacgccctcgtccaacatgggcgagctcgccgac
gaatgggccgcccacggcaaggccaacatctggggcagcgtgccgcgggtggtggagatg
cagtccgaaggcggcgctgccggcgcggtccacggtgcactgcaggcaggcgccctggcg
accaccttcaccgcgtcgcagggcctgctgctgatgatcccgaacatgtacaagatcgcc
ggcgaactcacgcccacggtcttccatgtcgcggcgcgcgcgctcgccacccatgcgctg
tcgatcttcggcgaccactccgacgtgatgtccacccgcgccaccggcttcgcgctgctc
gcgtccaactcggtgcaggaggcgcacgacttcgccgccatcgccaccgcggccacgctc
gccgggcgggtgccggtgctgcacttcttcgacggcttccgcacctcgcacgaggtgtcg
aagatcgacttcatccccgacgaggtcctgcacgcgctgctgccggacgcgcgcatcgcc
gcccagcgcgcacgcgcgctgtcgcccgagcacccggtgatccgcggcacctcgcagaac
ccggacgtgttcttccaggcgcgcgaggcgcagaacccctggttcgacgccttccccgcc
gtggtgcagcaggcgatggacgaattcgccgcgctcaccggccgccgctacacgctgttc
gactacgtcggcgcaccggatgccgagcgcgtgatcgtgatcatgggttcgggcgcggac
acggtggaagagaccgtcgcccacctcaacgcccgcggcgacaaggtcggcgtgctcaaa
gtgcgcctgttccgccccttcgcgcccgccgccctgctcgcggccttgccgcagagcgtg
cgcagcctggccgtgctcgaccgctgcaaggaacccggcgccgacggcgagccgctgttc
aaggacgtgatggtggcgctggccgaggaccaggcgggcgcggcgccgcgctttgccgcg
atgccgaaggtgatcggcggccgctacggcctgggctccaaggaattcaacccggccatg
gtgtgcgcgatctttgccgagctgcagcaggccgcgccgcgccgccggttcaccatcggc
atcgaggacgacgtcaccggcctgtccctgccctgggaccgcgccttccgcaccgacgcc
accgccagcgccttcgccgcggtgttctacggcctgggttcggacggcacggtgtcggcc
aacaagaactcgatcaagatcatcggcgacgagaccgcgctcttcgcccagggctatttc
gtctacgactcgaagaaatccggcgcgatgacggtgtcgcacctgcgcttcggcccgcag
ccgatccgctccgcctacctcaccggcgcgggcgatgcgaagttcgtcgcctgccaccag
ccgctgttcatcgcgcagcacgacctgctcgcccacgccgcgccgggcgcggtgttcctg
ctcaacgccagcgagcccgccgacaaggtatgggccgcgctgccgccgaccatgcagcgc
accatggtggagaagaagatcagcttctgggtcatcgatgcctaccaggtcgcgctggag
gccggcatggggcggcgcatcaacaccgtgatgcagacctgcttcttcgccatctccggc
atcctgccgcaggaccaggcgatcgccgcaatcaagcgcgcggtcgagaagacctacggc
cgcaagggccgccgcatcgccgagcagaactaccgcgccatcgacgccaccgtggccgcg
ctgcagcgggtggcggtgcccgaaacgctggccgcgctcgatgccgtgacaggcgaagcg
ccgatcacggccgccggcctcgatgccttcacccgccgcgtcaccatcccgctgatccag
ggcaagggcgacgcgctgccggtgtcgctgctgccggtcgacggcacctggccgaccggc
accgcccgccacgagaagcgcaacctcgcgctcgagatcccggtgtgggacgagaagctg
tgcacccagtgcggcaagtgcgtgttcgtgtgcccgcactcggcgatccgcgccaaggtc
ttcccggccgagcgcgtcgccgacgcacctgccgcgttcaagcacgtcccggcgcgcagc
aaggactacgcggcgggcacccacatgagctaccaggtggcgcccgaggattgcaccggg
tgcacgctgtgcgtggacgtgtgcccgatccgcgacaagtcgaacgtgtcgcacaaggcg
ctcaacatggcgccgcagccgccgctgcgcgcgcaggaggccgagaactgggactatttc
ctgcgcctgcccgacctcgcccgccgcgacgccaagcgcagcaccatccccggctcgatg
ctgctgcagccgctgttcgagttctccggcgcctgcgtgggctgcggcgagacgccctac
atccgcctcgccacccagctcttcggcgaccgcatgatggtggccaacgccaccggctgc
tcgtctatctacggcggcaacctgccgaccacgccctacaccaccgacgccgacggccgc
ggcccggcgtggaacaactcgctgttcgaggacaacgccgagttcggcctcggcatgcgc
ctggccaccgaccagctcgccgccgccgcgcgcacgcagttgcaggcgctggcggcgacg
cagggcgaggcgctcggcaatgaactcgtcgccgcgctgctcgacgccgaccagcattcg
gaggccggcatccacgagcaacgcgaacgcgtggcgctgctcaagcagaagctcgcgact
atcgacaccccggccgcgcgccagctcgccgcgctctcggaatacctgatccggcgcagc
gtgtggatcatcggcggcgacggctgggcctacgacatcggcttcggcggcctcgaccac
gtgctggcctcgggcgaggacgtgaacatcctggtgctcgacaccgaggtctattccaac
accggcgggcagaactccaaggccacgccgatgggcgcggtggccaagttcgccgccggc
ggcaagcccgcgcacaagaaggacctcgcaaagatagcgatggactacgagaacgtcttc
gtcgccaaggtggcctacggcgccaaggacgtgcatacgctgaaggccttcctcgacgcc
gagggctacccgggggtgtcgatcatcatcgcctacagcccctgcatcgcccacggcgtg
gacatgtccttcaacctgcaccagcaggatctggcggtgaagtccggccactggccgctg
ctgcgctacgacccacgcctgcgcgcgcagggccgcaacccgctgtcggtggatagcgct
gcgccgagcgtgccctaccgcgatttcgcccgcaacgaggcgcgcttcaccgtgctcgag
cgccagaacccggaggcctccgagcgcttcctcgacgaggccgaacgccacgcccgccac
cgccaccacgagtacgtggagctggccgcgctgcccggggtggacgagactgagcccaag
gacgctgccaccgacggcgccgcacaggacgccgcccccgccgcccgcaccggagacacc
cagaatggctga
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