Thauera sp. GDN1: CKCBHOJB_00334
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Entry
CKCBHOJB_00334 CDS
T09925
Symbol
acoR_1
Name
(GenBank) Acetoin catabolism regulatory protein
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
thag
Thauera sp. GDN1
Brite
KEGG Orthology (KO) [BR:
thag00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
thag03000
]
CKCBHOJB_00334 (acoR_1)
Transcription factors [BR:
thag03000
]
Prokaryotic type
Helix-turn-helix
Other families
CKCBHOJB_00334 (acoR_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
AAA_lid_14
Sigma54_activ_2
HTH_8
AAA_5
HTH_23
AAA_16
AAA_2
AAA
nSTAND6
DUF815
HTH_28
Mg_chelatase
HTH_30
HTH_29
AAA_22
HTH_50
HTH_1
AAA_7
AAA_3
Motif
Other DBs
NCBI-ProteinID:
WEN40801
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Position
complement(366758..368686)
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AA seq
642 aa
AA seq
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MLAQSQREHIDHVLAVSKTGAPPSDRIGRSWVRCIRDYGLDPCRPTRAHIVEHARLREHQ
DHIEEFLGVARTGMEQLYKRMAGIGYVLLLTDAHGIAVDFIGNDAWARELKQAGLYLGAD
WSEARAGTCAVGTCIVEKAPITVHHADHFDATHIALTCNAAPLFDPTGGFLGVLDVSALT
SPSPRDGQHLALQMTTMFAQMVEDANFLRYFRDRWVLRLGSAWSMVDVSAEIMLAFDADG
VIVGTNSGARRSLRPLHGGGNDALVGRPLGEIFREGMDSIWRIARAGFAADRTALSTGSG
EVYYGTVVQPRVAPRAARPSVTETAVRAPALERLAGDDPQMQRLIAQASRLVNRPVNILV
HGETGTGKEVLAKALHESSDRAAKPFVAVNCAAIPESLIESELFGYTAGTFTGGRSKGMR
GLIQQADGGTLLLDEIGDMPLHLQTRLLRVLAEREILPLGAEKPIPVNLTVVAASHRDLR
KLIAEGSFREDLYYRLCGAILYLPPLRERRDLDYLIDRLLAAEGGELGTSASLGPIARAA
LLEYSWPGNVRQLRNVLRFALAVCDGGTITTDDLPAELMSASHHDTPSLETTQPPRGEAA
ELEAALRRHRWNVTAAAAELGIVRATVYRQMKRFGIVPPNQL
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atgctggcccaatcccaaagggagcacatcgatcatgtgcttgccgtctcgaagaccggc
gcgcccccatccgatcgcatcggccgttcgtgggtacgctgtatccgcgactacgggctc
gacccttgccgtccgacgcgggcccacatcgtcgaacatgcgcgcctgcgcgaacaccag
gaccacatcgaggaattcctcggcgtcgcccgcaccggcatggagcagttgtacaagcgc
atggccggcatcggctacgtcctgttgctgaccgacgcgcacgggatcgcggtggacttc
atcggcaacgacgcctgggcgcgcgagctgaagcaggccgggctctaccttggcgccgac
tggagcgaggcgcgcgccggaacctgtgcggtgggcacctgcatcgtcgagaaggcgccg
atcaccgttcatcacgccgaccacttcgacgccacccacatcgcgctgacctgcaacgcc
gcacccttgttcgaccccaccgggggctttctcggcgtgctcgacgtctccgcactgacg
tcgccttcgccgcgcgacggccagcatctggcgctgcagatgaccacgatgtttgcgcag
atggtggaggacgccaacttcctgcgctatttccgcgatcgctgggtgctgcgcctgggc
tcggcgtggtcgatggtggatgtatcggcagagatcatgctcgccttcgatgccgacggg
gtcatcgtcggcaccaacagcggagcgcggagatcattgcgaccattgcacggcggcggt
aacgacgccctggtcggccgccccctgggcgagatcttccgtgaaggcatggattcgatc
tggcgcatcgcccgggcaggcttcgccgccgaccgcacagcgctgtcgaccggcagcggc
gaggtctactacggcactgtcgtgcagcctcgggtcgcaccgcgcgcagcgcgaccgagc
gtaaccgagaccgccgtgcgcgcaccggcgctcgagcgcctggctggcgatgatccgcag
atgcagcgcctgatcgcgcaagcctccaggctggtcaaccgcccggtgaacatcctcgtc
cacggcgagaccggcaccggcaaggaggtgctggccaaggccctgcacgaatccagcgat
cgggccgcgaagcccttcgttgccgtcaattgcgcggccattcccgagtccctgatcgag
agcgagctgttcggctataccgccggaaccttcaccggcgggcgcagcaagggcatgcgc
ggtctcatccagcaggcagacggtggcaccctgctgctcgacgagatcggcgacatgccg
ctgcacctgcagacccggctgctgcgggtcctggccgagcgcgagatcctgccgctcggc
gccgaaaagccgatccccgtgaacctgaccgtggtcgccgcctcccatcgcgacttgcgc
aagctgattgccgagggcagctttcgcgaggatctctactaccgcctgtgcggcgccatc
ctttacctgccgccactgcgcgagcgccgcgacctcgactacctgatcgaccgcttgctg
gcggcggaggggggtgaattgggcaccagcgcaagcctcggaccgattgcgcgcgccgcc
ctgctcgaatacagctggccaggcaacgtccgccagttgcgcaacgtgttgcggtttgcg
ctcgcggtctgcgacggcggcacgatcaccaccgacgacctgcccgccgagctcatgtcc
gcgagtcaccatgacaccccgtcactcgagacgacgcagccgccgcgcggcgaagccgcc
gaactggaggccgccctgcgccgccatcgctggaacgtcaccgccgccgccgcggaactc
ggcatcgtgcgcgcgacggtctatcggcagatgaagcgcttcgggatcgtgccaccgaac
cagctctag
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