Thauera sp. GDN1: CKCBHOJB_00371
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Entry
CKCBHOJB_00371 CDS
T09925
Symbol
phrB
Name
(GenBank) (6-4) photolyase
KO
K06876
(6-4)DNA photolyase [EC:
4.1.99.13
]
Organism
thag
Thauera sp. GDN1
Brite
KEGG Orthology (KO) [BR:
thag00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
thag03400
]
CKCBHOJB_00371 (phrB)
Enzymes [BR:
thag01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.13 (6-4)DNA photolyase
CKCBHOJB_00371 (phrB)
DNA repair and recombination proteins [BR:
thag03400
]
Prokaryotic type
SSBR (single strand breaks repair)
Direct repair
CKCBHOJB_00371 (phrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPRP
Motif
Other DBs
NCBI-ProteinID:
WEN40838
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All DBs
Position
complement(410326..411873)
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AA seq
515 aa
AA seq
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MTTLRLILGDQLNAAHSWFRVPRADVLYLMMEVRSETDYVRHHAQKVLAIFAAMRAFAAA
LEAAGHRVRYLKIGDADNRQAFAANLAQVAAECGATRFERMEADEWRVERLLDEAAQTLA
LPHAVVGSEHFLADRVELAQRFAAKVPRMEFFYRDMRRRHRILVDAEDGPVGGVWNFDAQ
NREKWPGDPPAPEWPWGGHDLTTLWDEIIAAGVQTIGTPHAERVRWPLTRREARTGLAHF
VEHALPWFGPYQDAMSTRSTTLFHSGLSFALNIKLLHPRELIDAAVGAWQAGKVELASCE
GFVRQILGWREFVRGVYWARMPGYAQGNALDARRPLPGWYWTGDTKMACLRYAIGQSLDT
AYAHHIQRLMITGNFALLAGCDPDAVDAWYLGIYADAFEWVEMPNTRGMSQFADGGVIAS
KPYAGAASYIGKQSDYCKACAYDPRRRHGRDVGKSGEPACPFNSLYWDFLLRHQARFARN
PRMAMPYKAWAKMDEAERAATLAQAAHYLGRLDTL
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atgaccaccctccgcctcatcctcggcgaccagctcaacgccgcccattcctggttccgc
gtcccgcgcgccgacgtgctctacctgatgatggaggtgcgcagcgagaccgactacgtg
cgccaccacgcgcagaaggtgctggcgatcttcgctgcgatgcgcgcctttgccgccgcg
ctggaggccgccggccaccgggtgcgctacctgaagatcggcgacgccgacaaccgccag
gccttcgccgccaacctggcgcaggtggcggccgaatgcggcgcaacgcgcttcgagcgc
atggaggccgacgagtggcgggtggagcgcttgctggacgaagccgcgcagacgctggcc
ctgccgcatgcggtggtcggcagcgaacacttcctcgccgaccgcgtcgagctcgctcag
cgcttcgccgccaaggtgccgcgcatggagttcttctaccgcgacatgcgccgccgccac
cgcatcctggtcgatgccgaggacggcccggtgggcggggtgtggaacttcgacgcgcag
aatcgcgagaagtggccgggcgatccgcctgcgccggagtggccgtggggcggccacgac
ctgacgacgctctgggacgagatcatcgctgccggcgtgcagaccatcggcacgccgcac
gccgagcgggtacgctggccgctgactcgccgcgaggcgcgcaccggcctggcgcacttc
gtcgaacacgccctgccctggttcggcccctaccaggacgcgatgagcacgcgctcgacc
acgctgttccactccgggctctcgttcgcgctcaacatcaagctgctgcatccgcgcgaa
ctcatcgatgccgcggtcggggcctggcaggcgggcaaggtagagctggcgagctgcgag
ggcttcgtgcgccagatcctgggctggcgggaattcgtgcgcggggtgtattgggcgcgc
atgcccggctatgcgcagggcaacgcgctcgatgcgcgacgtccgctgccaggctggtac
tggaccggcgacacgaagatggcctgcctgcgctacgccatcggccagtcgctggacacg
gcctacgcccaccacatccagcgcctgatgatcaccggcaacttcgcgctgctcgccggc
tgcgacccggacgcggtcgacgcctggtacctgggcatctacgccgacgccttcgagtgg
gtggagatgcccaatacccgcggcatgagccagttcgccgacggcggcgtgatcgccagc
aagccctacgccggtgcggcgagctacatcggaaagcagtcggactactgcaaggcctgc
gcctacgacccaaggcgccgccatggccgcgatgtcggcaagagcggcgagcccgcctgc
cccttcaacagcctgtactgggacttcctgctccgtcaccaggcccgcttcgcgcgcaac
ccgcgcatggcgatgccctacaaggcgtgggcgaagatggatgaagcggagcgcgccgcc
accctggcgcaggcggcgcactacctcggcaggctcgacacgctctga
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