Thauera sp. GDN1: CKCBHOJB_00506
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Entry
CKCBHOJB_00506 CDS
T09925
Symbol
phrA
Name
(GenBank) Deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
thag
Thauera sp. GDN1
Brite
KEGG Orthology (KO) [BR:
thag00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
thag03400
]
CKCBHOJB_00506 (phrA)
Enzymes [BR:
thag01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
CKCBHOJB_00506 (phrA)
DNA repair and recombination proteins [BR:
thag03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
CKCBHOJB_00506 (phrA)
Prokaryotic type
CKCBHOJB_00506 (phrA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Usp
BDI_1685-like_C
Motif
Other DBs
NCBI-ProteinID:
WEN40972
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All DBs
Position
572293..573747
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AA seq
484 aa
AA seq
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MPSALVWFRRDLRSFDHAALYHALRFADRVHCAFVFDTAILDALPSRQDRRVEFIHASLA
ELDAALDTMARAAGAAGGGLLVRHGRAEDEVPRLARELGVDKVFANRDYEPEAIVRDSRV
AQALAEAGIGYEDFKDQVVFERDEVLTQTGKPYSVFTPYKNAWLKKVDDFQLESYPVKKY
AARLAAKPAGETVSSLADIGFEPTNLAELQIPLGMSGGRKLFVDFAARIERYKRARDFPA
VKGVSYLSTHLRFGTVSIRQLAAHAHAHGGEGAETWLSELIWRDFYHQILWHHPQVVERA
FRPEYDAVKWDDAPELFAAWCEARTGYPIVDAAMRQLNQTGWMHNRLRMIVASFLTKDLG
IDWRLGERYFAAHLNDYDLAANNGGWQWAASTGCDAQPWFRIFNPVTQSERFDPEGRFIR
RYLPELARVPDKFIHAPWTMGGIDQSACRTKIGVDYPGPIVDHAAARERTLQRFGVVKNE
AQGR
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgccttccgccctcgtctggttccgtcgcgatctgcgcagcttcgaccatgccgcgctc
taccacgccttgcgcttcgccgatcgcgtgcattgcgccttcgtcttcgataccgccatc
ctcgacgcgctgccctcgcgccaggaccgccgcgtcgagttcatccacgccagcctggcc
gagctggacgcagcgctcgacaccatggcgcgtgcggcgggggcagccggcggcgggctg
ctcgtgcgccacggccgcgccgaggacgaagtcccgcgcctggcgcgcgaactgggcgtc
gacaaggtcttcgccaaccgcgactacgagcccgaggcgatcgtgcgcgacagccgggtg
gcgcaggcgctggccgaggccggtatcggctacgaggatttcaaggaccaggtcgtcttc
gagcgcgacgaggtgctgacccagaccggcaagccctacagcgtgttcacgccgtacaag
aacgcctggctcaagaaggtggacgacttccagctcgagtcatatccggtaaaaaaatac
gccgcgcgtctcgccgcgaagcctgcgggcgagaccgtgtcctcgctcgccgacatcggc
ttcgagcccaccaacctggccgaactgcagatccccctcggcatgagcggcggcagaaag
ctgttcgtggacttcgccgcgcgcatcgagcgctacaagcgcgcgcgcgacttcccggcg
gtgaagggcgtcagctacctgtcgacgcatctgcgcttcggcaccgtgtccatccgccaa
ctcgccgcccacgcccatgcgcacggcggcgagggcgccgagacctggctgtcggagctg
atctggcgcgacttctaccaccagatcctgtggcaccacccgcaggtggtcgagcgcgcc
ttccgccccgagtacgacgccgtgaagtgggacgacgcgcccgaactcttcgccgcctgg
tgcgaggcgcgcaccggctacccgatcgtcgatgccgcgatgcgtcagttgaaccagacc
ggctggatgcacaaccgcctgcgcatgatcgtcgcctctttcctcaccaaggatctcggc
atcgactggcgcctgggcgagcgctatttcgccgcgcatctgaacgactacgacctcgcc
gccaacaacggcggctggcagtgggcggcctccaccggttgcgacgcccagccgtggttc
cgcatcttcaaccccgtcacccagtccgagaggttcgaccccgagggccgcttcatccgc
cgctacctgcccgagctcgcccgcgtgcccgacaagttcatccacgcgccgtggaccatg
ggcggaatcgaccagagcgcgtgccggacgaagatcggcgtcgattacccgggccccatc
gtcgaccacgccgccgcgcgcgaacgcaccctgcaacgcttcggggtcgtgaagaacgag
gcgcaaggccgatag
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