Thauera sp. GDN1: CKCBHOJB_00685
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Entry
CKCBHOJB_00685 CDS
T09925
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
thag
Thauera sp. GDN1
Brite
KEGG Orthology (KO) [BR:
thag00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
thag03021
]
CKCBHOJB_00685 (rpoH)
Transcription machinery [BR:
thag03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CKCBHOJB_00685 (rpoH)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
KORA
UCR_14kD
HTH_15
Motif
Other DBs
NCBI-ProteinID:
WEN41144
LinkDB
All DBs
Position
complement(762962..763813)
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AA seq
283 aa
AA seq
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MSHALTFPVPAAGSLDQYIQSVNRMPMLSEQQEVDLATRLRDEGDVDAARQLVMSHLRVV
VAIARGYLGYGLPHADLIQEGNIGLMKAVKRFDPTRGVRLVSFAIHWIKAEIHEYILKNW
RLVKIATTKAQRKLFFNLRGMKQDSTTLQPAEVQSIAAQLGVKPEEVVEMETRLTGRDIP
LDAGSDDEDERFAPIAYLPDPHAEPSEVIEQTQLARLQDSGLKSALASLDERSRAIVQRR
WLGEGDSATLHELAAEYGVSAERIRQIEAKAMQKMRGMLAALA
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atgtcacacgccctgacctttcccgttcccgccgccggcagcctggatcagtacatccag
agcgtgaatcgcatgccgatgctgagcgagcagcaggaggtggatctggcgacgcggctg
cgtgacgagggcgatgtggatgcggcgcggcaactggtcatgtcgcatctgcgcgtcgtc
gtcgccatcgcacgcggctatctcggctacggcctgccgcacgcggacctgatccaggaa
ggcaacatcggcctgatgaaggcggtcaagcgcttcgacccgacgcgcggcgtgcgtctg
gtgtcgttcgcgatccactggatcaaggccgagatccacgagtacatcctgaagaactgg
cgcctggtgaagatcgccaccaccaaggcgcagcgcaagctgttcttcaacctgcgcggc
atgaagcaggacagcaccacgctgcagcccgccgaggtgcagtcgatcgccgcccagctc
ggcgtcaagcccgaggaagtggtggagatggaaacgcggctgaccggccgcgacatcccg
ctcgacgccggcagcgacgacgaggacgagcgcttcgcacccatcgcctacctgcccgac
ccgcacgccgagccgagcgaggtcatcgagcagacccagctcgcccgcctgcaggacagc
ggcctcaagagcgcgctcgccagcctcgacgagcgcagccgcgccatcgtccagcgccgc
tggctcggcgaaggcgacagcgccacgctgcacgagctggccgccgaatacggcgtctcc
gccgagcgcatccgccagatcgaagccaaggcgatgcagaagatgcgcgggatgctggcg
gcgcttgcctga
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