Thauera sp. GDN1: CKCBHOJB_00709
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Entry
CKCBHOJB_00709 CDS
T09925
Symbol
rluF
Name
(GenBank) 23S rRNA pseudouridine(2604) synthase
KO
K06182
23S rRNA pseudouridine2604 synthase [EC:
5.4.99.21
]
Organism
thag
Thauera sp. GDN1
Brite
KEGG Orthology (KO) [BR:
thag00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
thag03009
]
CKCBHOJB_00709 (rluF)
Enzymes [BR:
thag01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.21 23S rRNA pseudouridine2604 synthase
CKCBHOJB_00709 (rluF)
Ribosome biogenesis [BR:
thag03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
CKCBHOJB_00709 (rluF)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
SYY_C-terminal
Motif
Other DBs
NCBI-ProteinID:
WEN41168
LinkDB
All DBs
Position
787004..788377
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AA seq
457 aa
AA seq
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MRRLPARAGRVSGWGPGGRVWATGLGDNAALISQGTLVNTTRRNPPKPTPSRISGTLKLR
VRDTAEADASVSGEEREPERTPAAPRADKAPPQGRPAREPAAAGREPTPSGRGRPRAAGG
ERGERGRRPEAGERPQRGGEERRKPDAARRSPNRDRPEAPRATPERRSADAPRRAADRNV
PEAPRPAPARRKTDAARAAPAAAPRPPRMDDAVPPEGVRLSKVMAERGICSRREADEFIE
RGWVFVDGKRVSELGVRIDPEARVTLAPEATRTQQQRVTILLHKPVGYVSGQPEPGYAPA
VSLIGADNQFDRDSAQRFHPSQLKNLAPAGRLDIDSTGLLVLTQDGRVARQLIGEDSAID
KEYIVRVEGTLAENGLALLNHGLWLDDRPLRPAQVEWINDDQLRFVLREGRKRQIRRMCE
LVGLKVVGLKRVRIGRVKLGELPLGQWRYLREDERFG
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgcggcgcctgcccgctcgcgcgggacgggtgagcgggtgggggcctggaggacgggtt
tgggcgacgggtttgggcgataatgcggccttgatcagccaggggacgctcgtgaacacc
acccgccgtaatccgcccaagcccacgccttcgcgcatcagcggcacgctcaagctgcgt
gtgcgggacaccgcggaggcggacgcttccgtttccggcgaggagcgcgagcccgagcgc
acgcccgctgcgccgcgcgccgacaaggccccgccgcaagggcgcccggcgcgtgagccg
gccgctgcagggcgcgaaccgacgccgtccggacgtggccgcccgcgcgccgcgggcggc
gaacgcggcgaacgcggtcgcaggccggaggccggcgagcgcccgcagcgcggcggcgag
gagcgcaggaagccggacgcggcgcgcaggtccccgaatcgcgaccggccggaggcgccg
cgcgcaacgccggagcgccgaagcgcggatgcgccgcgcagggccgcggaccgcaatgtc
cccgaggcaccgcgcccggcgccggcgcgccggaagaccgacgcagcgcgcgccgctccc
gcggccgcaccgcgtccgccgcgcatggacgacgcggtaccgcccgagggcgtgcgcctg
tccaaggtcatggccgagcgcggcatctgctcgcggcgcgaggccgacgagttcatcgag
cgcggctgggtcttcgtcgacggcaagcgcgtgtccgagctcggcgtgcgcatcgacccc
gaggcgcgcgtgacgctcgcccccgaggccacccgcacgcagcagcagcgcgtcaccatc
ctgctgcacaagccggtcggctacgtctccggccagcccgagccgggctatgcgcccgcg
gtcagcctgatcggcgccgacaaccagttcgaccgcgacagcgcgcagcgcttccacccc
agtcagttgaagaatctcgcccccgccggccggctggacatcgactccaccggcctgctg
gtgctgacccaggacggccgcgtcgcgcgccagctgatcggcgaggattccgcgatcgac
aaggagtacatcgtccgcgtcgaaggcaccctggccgagaacggcctggcgctgctgaac
cacggcctgtggctggacgaccgcccgctgcgcccggcgcaggtggagtggatcaacgac
gaccagctgcgcttcgtgctgcgcgagggccgcaagcgccagatccgccgcatgtgcgag
ctggtggggttgaaggtggtcgggctgaagcgggtgcgcatcggccgggtgaagctggga
gaacttccgctcgggcagtggcgttacctgcgcgaggacgagcggttcgggtga
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