Thauera sp. GDN1: CKCBHOJB_00771
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Entry
CKCBHOJB_00771 CDS
T09925
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoylalanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
thag
Thauera sp. GDN1
Pathway
thag00470
D-Amino acid metabolism
thag00550
Peptidoglycan biosynthesis
thag01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
thag00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
CKCBHOJB_00771 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
CKCBHOJB_00771 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
thag01011
]
CKCBHOJB_00771 (murD)
Enzymes [BR:
thag01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
CKCBHOJB_00771 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
thag01011
]
Precursor biosynthesis
Amino acid ligase
CKCBHOJB_00771 (murD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
MurD-like_N
Mur_ligase_C
2-Hacid_dh_C
NAD_binding_7
DUF6798
Motif
Other DBs
NCBI-ProteinID:
WEN41226
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Position
850745..852151
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AA seq
468 aa
AA seq
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MSELTGKHVLVLGLGESGLAMARWCALRGARVRVVDSRATPPGLDALRADAPLAEIVVGE
FGAEVLDGIELVALSPGLDPRLGVAAEARRRGLPVTGEMSLLAQALDELGVRAQTRILAI
TGTNGKTTTTALTAALAQSAGIDAVAAGNISPAALDVLMERLEIGAALPACWVLELSSFQ
IETMHGLDPDAATVLNVTDDHLDRYAGLDEYAATKAAIFQGQGVQVLNRDDARVDAMASA
GCRAIRFGTSAPTAAQDYGLADADADGRTWLVRGAVRLLALADLPLAGRHNAANALAALA
LCEGGLDIAPQRLINGLLAFRGLPHRVELVAERADGVRFYDDSKGTNVGATVAALAGMDC
PVVLIAGGDGKGQDFSPLAEVFASKARAVVLIGRDAGRIEAAVAGCGVALEHAADLDAAV
LRANALARPGDAVLLSPACASLDMFRNYAHRAEVFIAAARRLPEVTPR
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaacttacgggcaaacacgttctcgtcctcggcctcggcgaatcgggcctcgcg
atggcgcgctggtgcgcgctgcgcggtgcacgcgtgcgcgtggtcgacagccgcgccacc
ccgcccgggctggatgccctgcgcgcggacgcaccgctggccgagatcgtcgtcggcgag
ttcggtgccgaggtgctcgacggcatagagctggtggcgctgagccccgggctcgacccg
cgcctgggcgtcgcagccgaggcgcgtcggcgcggcctgccggtcaccggcgagatgagc
ctgctcgcgcaggcgctggacgaactcggcgtgcgcgcgcagacccgcatcctcgccatc
accggtaccaacggcaagaccaccaccaccgcgctcacggcggcgctggcgcagtcggcg
gggatcgacgcggtggcggccggcaacatcagcccggcagcgctcgacgtgctgatggag
cggctggagatcggtgccgcgctgcccgcatgctgggtgctggagctctccagcttccag
atcgagaccatgcatggcctcgatcccgatgcggccacggtgctcaacgtgaccgacgac
catctcgaccgctacgccggtctcgacgagtacgccgcgaccaaggcggcgatcttccag
ggccagggcgtgcaggtgctgaaccgcgacgatgcgcgcgtcgacgcgatggccagcgcc
ggctgccgcgcgatccgcttcggtacttcggcgccgaccgccgcgcaagattacgggctc
gccgacgccgacgccgacggccggacctggctggtgcgtggcgcggtgcgcctgctcgcg
ctcgccgacctcccgctcgccggtcgccacaacgcggccaatgcgctggcagcgctcgcc
ctgtgcgagggcgggctcgacatcgccccgcagcgcctgatcaacggtctgctcgccttc
cgtggcctgccacaccgggtcgagctggtggccgaacgcgccgacggcgtgcgcttctac
gacgattcgaagggtaccaacgtcggtgccacggtggcggcgctggcgggcatggactgc
ccggtggtgctgatcgcgggcggcgacggcaagggccaggacttctcgccgctggccgag
gtgttcgccagcaaggcgcgcgcggtggtgctgatcggccgcgacgccggacgcatcgag
gccgcggttgccggctgcggggtggcgctcgagcacgccgccgacctcgacgccgcggtg
ctgcgcgccaacgcgctcgcccgcccgggcgacgccgtgctgctgtcgccggcctgcgcc
agcctcgacatgttccgcaactacgcgcaccgcgccgaggtgttcatcgccgcggcgcgc
cggctgcccgaggtgaccccgcgatga
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