Thauera sp. GDN1: CKCBHOJB_00775
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Entry
CKCBHOJB_00775 CDS
T09925
Symbol
ddlB
Name
(GenBank) D-alanine--D-alanine ligase B
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
thag
Thauera sp. GDN1
Pathway
thag00470
D-Amino acid metabolism
thag00550
Peptidoglycan biosynthesis
thag01100
Metabolic pathways
thag01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
thag00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
CKCBHOJB_00775 (ddlB)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
CKCBHOJB_00775 (ddlB)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
CKCBHOJB_00775 (ddlB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
thag01011
]
CKCBHOJB_00775 (ddlB)
Enzymes [BR:
thag01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
CKCBHOJB_00775 (ddlB)
Peptidoglycan biosynthesis and degradation proteins [BR:
thag01011
]
Precursor biosynthesis
Amino acid ligase
CKCBHOJB_00775 (ddlB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp
ATP-grasp_3
ATPgrasp_ST
CPSase_L_D2
RimK
ATP-grasp_4
Myb_DNA-bind_8
TTL
Motif
Other DBs
NCBI-ProteinID:
WEN41230
LinkDB
All DBs
Position
855850..856764
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AA seq
304 aa
AA seq
DB search
MKAKYGKVAVLFGGGSAEREVSLMSGSAVLAALQAAGVDAHAFDPAERDLHVLKEEGFDR
AFIALHGRGGEDGTVQGALELMGIPYTGSGVMASALSMDKWRTKMVWLAAGLPTPRYAIL
QHDTDWDAVAAELGLPIFVKPVHEGSSMGATKVAAADQLQAAWELAARYDSLVIAEEFIS
GDELTAPFLEDRALPLVRIVAPEGNYDYQHKYFTDDTRYDCPCGLPAEQEAVLQALVMKS
ARVLGCRGWGRADLILTADGRPYLLEMNTSPGMTGHSLVPMSARMAGLDFTALCLRILDG
ARLG
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
gtgaaggcgaagtacggaaaggtagcggtgctgttcggcggcgggtccgccgagcgcgag
gtgtccctgatgtcgggcagtgcggtgctcgccgcgctgcaggccgcgggggttgatgcg
cacgccttcgacccggccgaacgcgacctccacgtcctcaaggaggaaggcttcgaccgc
gccttcatcgcgctccacggccgcggcggcgaggacggcaccgtgcagggcgcgctcgag
ttgatggggatcccctacaccggcagcggggtgatggcctccgcgctgtcgatggacaag
tggcgcaccaagatggtgtggctggccgccggcctgcccaccccgcgctacgcgatcctg
cagcacgacaccgactgggacgcggtggccgccgagctcggcctgccgatcttcgtcaag
ccggtgcatgaaggctccagcatgggtgcgaccaaggtcgccgcggccgaccagctgcag
gcggcctgggaactggcggcacgctacgacagcctggtgatcgccgaggagttcatctcc
ggcgacgaactgactgcgcccttcctggaggaccgtgcgctgccgctggtgcgcatcgtc
gcgccggaaggcaactacgactaccagcacaagtacttcaccgatgacacccgctacgac
tgcccctgcggcctgcccgccgagcaggaggccgtgctgcaggccctggtgatgaagtcg
gcgcgggtgctgggctgccgtggctggggccgcgccgacctgatcctgaccgccgacggc
cgtccctacctgctcgagatgaacacctcgccgggcatgaccggccactcgctggtgccg
atgtcggcgcgcatggccgggctggacttcaccgcactgtgcctgcgcatcctcgacgga
gcccgccttggctga
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