Thauera sp. GDN1: CKCBHOJB_00860
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Entry
CKCBHOJB_00860 CDS
T09925
Symbol
apxIB_1
Name
(GenBank) Toxin RTX-I translocation ATP-binding protein
KO
K12541
ATP-binding cassette, subfamily C, bacterial LapB
Organism
thag
Thauera sp. GDN1
Pathway
thag02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
thag00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
CKCBHOJB_00860 (apxIB_1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
thag02000
]
CKCBHOJB_00860 (apxIB_1)
02044 Secretion system [BR:
thag02044
]
CKCBHOJB_00860 (apxIB_1)
Transporters [BR:
thag02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
CKCBHOJB_00860 (apxIB_1)
Secretion system [BR:
thag02044
]
Type I secretion system
Adhesin protein transporter
CKCBHOJB_00860 (apxIB_1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
Peptidase_C39
SMC_N
AAA_21
DUF87
Motif
Other DBs
NCBI-ProteinID:
WEN41312
LinkDB
All DBs
Position
942373..944571
Genome browser
AA seq
732 aa
AA seq
DB search
MSEADVAELHVSRAGAPRREGARAAPAQARQDLVDCLQLVARAHGIATTRDALLAGLPVG
AEGLSPSLFERAARRAGMASNIVRRPLEALNTALFPAIVLLDQDHACVLAGWSADGTRAR
VIFPELGEAELELPRAELAARYSGRTIYVRPQVRFDARAPEVHALRERHWFWGRIAENRA
LYRDVLLAALLVNLFAIAMPLFVMNVYDRVVPNNAVETLWVLALGVGIVLVGELVLRTLR
GYFVDLAGSRADVRISAHIMERVLGMRMEERPPSAGSFAANLRAFESVRDFIGSATVVAF
VDLPFALLFLVVIGWIAWPLVIPFVLGVAVLLLYAIGVQGRMHALAETTYRAGAQRNATL
VEGLVGLETLKAIGAEAPMQRKWEKSAALLSRVTAQLRLLAASASHASAFAQQVVGVAII
VLGVYLIGQGELSMGGLIACYMLSSRAMAPVGQVTGLLTQYHNASTALASLEQVMSREVE
RPDGKAFISRGSLAGDIEFRDVSFTYPGQQVEALKNVSLRIRAGERVGILGRVGSGKSTL
EKLILGLYRPSSGAVLIDGIDQRQLDPAELRRHIGYVAQDVTLFYGSLRDNITIAAPLAD
DADVLHAATLAGLAEFVNTHPQGFDMLVGERGDSLSGGQRQGVALARAMINDPPILLLDE
PTAAMDHSSEEELKRRLAEFARGKTMIVVTHRTSLLDLVDRIVVVDGGRIVADGPKAKVV
EALRQGRIGRAA
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
gtgagtgaagcggacgtagcggagttgcatgtcagccgtgcgggagcgccgcggcgggag
ggcgcgcgtgccgccccggcgcaggctcgccaggatctggtcgattgcctgcagctggtg
gcgcgcgcacacggcatcgccaccacccgcgacgccctgcttgccggtctgccggtgggc
gccgagggcctgtcgccctcgctcttcgagcgcgccgcgcgtcgcgccgggatggcgagc
aacatcgtccgccgcccgctcgaggcgctcaacaccgcgctgtttccggccatcgtgctg
ctcgatcaggatcacgcctgcgtgctcgccggctggagcgcggatggcacccgcgcgcgg
gtgatcttccccgagctcggcgaggccgaactcgagctgccacgtgccgagctcgccgcg
cgctacagcggacggacgatctacgttcgcccgcaggtgcgcttcgatgcgcgcgcgccc
gaggtccacgccttgcgcgaacgccactggttctgggggcggatcgccgagaaccgtgcg
ctctatcgcgacgtgctgctcgccgccctgctggtgaacctgttcgcgatcgcgatgccg
ctcttcgtcatgaacgtgtacgaccgcgtggtgccgaacaatgcggtcgagacgctgtgg
gtgctggcgctcggcgtcgggatcgtgctggtgggcgagctcgtgctgcgcaccctgcgc
ggctacttcgtcgatctcgccggcagtcgcgccgacgtgcgcatctccgcgcacatcatg
gagcgggtgctcggcatgcgcatggaggagcgtccgccctcggccggatccttcgctgcc
aacctgcgcgccttcgagtcggtgcgcgacttcatcggctcggcgacggtggtcgccttc
gtagatctgccgttcgcgctgctgttcctggtcgtgatcggctggatcgcctggccgctg
gtgatccccttcgtgctcggcgtggccgtcctcctgctctatgcgatcggcgtgcagggg
cggatgcacgcgctggccgagacaacctatcgtgccggcgcgcagcgcaacgccaccctg
gtcgagggcctggtggggctggagacgctgaaggcgatcggcgccgaggcgccgatgcag
cgcaagtgggagaagagcgccgcgctgctgtcgcgcgtcaccgcccagctgcgcctgctg
gcggcgagcgcgagccatgcctcggccttcgcgcagcaggtggtgggcgtcgcgatcatc
gtgctcggggtgtatctgatcggccagggcgagctgtcgatgggtggcctgatcgcctgc
tacatgctgtcctcgcgcgcgatggcgccggtcggccaggtgaccggcctgctcacccag
tatcacaacgcctcgaccgcgctcgcttcgctcgagcaggtgatgtcgcgcgaggtcgag
cgcccggacggcaaggccttcatcagccgcggcagcctagccggcgacatcgagttccgc
gacgtcagcttcacctatcccggccagcaggtcgaggcgctgaagaacgtgtcgctgcgc
atccgcgccggagagcgcgtcggcatcctcggtcgcgtcggctcgggcaagagcacgctc
gagaagctcatcctcggtctctaccggccgagctcgggggcggtgctgatcgacggcatc
gatcagcgccagctcgatccggccgagctgcgccgccacatcggctacgtcgcccaggac
gtgaccctgttctacggcagcctgcgcgacaacatcacgatcgccgcgccgctcgccgac
gacgccgacgtgctgcatgcggcgacgctcgccgggctcgccgagttcgtcaatacccat
ccgcaaggcttcgacatgctggtgggcgagcgtggggactcgctgtccggcgggcagcgt
caaggcgtcgcgctggcgcgggcgatgatcaacgatccgccgatcctgctcctcgacgag
cccaccgcggcgatggaccactcgagcgaggaagagctaaagcgccgcctggccgagttc
gcgcgcggcaagaccatgatcgtggtcacccatcgcacctcgctgctggatctggtcgat
cgcatcgtcgtcgtcgacggcgggcgcatcgtcgccgacggcccgaaggccaaggtggtc
gaggccctgcgccagggccggatcgggagggcggcatga
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