Thauera sp. GDN1: CKCBHOJB_01037
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Entry
CKCBHOJB_01037 CDS
T09925
Symbol
algE7
Name
(GenBank) Alginate lyase 7
Organism
thag
Thauera sp. GDN1
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF5801
LapA
HemolysinCabind
Motif
Other DBs
NCBI-ProteinID:
WEN41485
LinkDB
All DBs
Position
1133019..1141598
Genome browser
AA seq
2859 aa
AA seq
DB search
MAQAIAVVVAVTGRAFARDAEGNLRALKAGDTLKEGEVVITMSGGSVELAMSDGAPMTVA
ADQTVTLTADVSETTRPAREDAEIIQGTVDQVIQALERGADIEDLEEPAAGLSGGGGGEG
NNFVRLLRITEGVTPLEFDYRLLSTERLEPEERGLPAEEEEPVNATVTLSDLIVFEGSGT
ATITATVSSPVTGSDLVIELSNGAVIVIPVGSTTGTSTPFPIQGEDPYIDPETITIEVVD
TGGSDFGTVTPTGPATVEVRDTIDSTNTSLTVTLEAAPSLTEDGTTLTYVVTLDAPVRPG
DDPVRVSFIDLAGNPQTITITEGTSAFLDVLIPEALFEDVYKEADAMLPVATNVVLTGGS
DFEALDPPVVGSVTLVDTIDTTTVTLGDVTVAEGSGTATITATVSNPVTGNALVITLSNG
ATVTIPVGQSSAVSTPFAVQGDDPYLDAESYAVSITGAAGGNYEALDTSDTATVTIDDTT
NTTTVTLGDVAVAEGSGTATITATVSNPVTGSALVITLSNGAMVTIPVGQSSAVSTPFAV
QGDDPYLDAESYAVSITGAAGGNYEALDTSDTATVTIDDTTNTITVTLGDVAVAEGSGTA
TITATVSNPVTGSALVITLSNGATVTIPVGESSAASTPFAVQGDDPYVDPESYTVSIAGT
AGGNYEALDTSDTATVTIDDTEDTTIVMLDASSEVPELGGTITYTASVADAPLGTPLTIS
LSNGAEIVIPVGSLSGSTTVPMTKADLEAISGDSVTVTITDATGGTYEALDTSDDAVTRI
DRVVEVEGDSLALNEADLVGAGGTLTPVTAQGSFVITAPDGVGSLTIQNLTIGDMQVIVD
GVFTPTSATTPLGNTLAVTAFDPATGTITYSYELNAAETHTQPTNDTELVEQFGVVVTDG
DPVDPNVASSLLTVTITDDRPVVEIQELGSSVSLDETNAFTGGTPGSFPITATSADPVLS
FTSDFGADGAAASNATTYGLSIVGDGATLLKTAVGDQAITLVQTSATTITGQYGAGLTAF
TVSIGADGKLTVTQSVALEHTTDGGTAADHNDALTLNGLINASVTVTDADGDTATDSIGV
GGAISFYDDGPAVDVTAVASSVSLDETNAFTGGTPGSFPITATSADPVLSFTSDFGADGA
AASNATTYGLSIVGDGATLLKTAVGDQAITLVQTSATTITGQYGAGLTAFTVSIGADGKL
TVTQSVALEHTTDGGTAADHNDALTLNGLINASVTVTDADGDTATDSIGVGGAISFYDDG
PAVDVTAVASSVRLDETNAFTGGTPGSFPITATSADPVLSFTSDFGADGAAASGATTYGL
SIVGDGATLLKTAVGDQAITLVQTSATTITGQYGAGLTAFTVSIGADGKLTVTQSVALEH
TTDGGTATDHNDALTLNGLINASVTVTDADGDTATDSIGVGGAISFYDDGPAVDVTAVAS
SVSLDETNAFTGGTPGSFPITATSADPVLSFTSDFGADGAAASNATTYGLSIVGDGATLL
KTAVGDQAITLVQTSATTITGQYGAGLTAFTVSIGADGKLTVTQSVALEHTTDGGTAADH
NDALTLNGLINASVTVTDADGDTATDSIGVGGAISFYDDGPAVDVTAVASSVRLDETNAF
TGGTPGSFPITATSADPVLSFTSDFGADGAAASNATTYGLSIVGDGATLLKTAVGDQAIT
LVQTSATTITGQYGAGLTAFTVSIGADGKLTVTQSVALEHTTDGGTAADHNDALTLNGLI
NASVTVTDADGDTATDSIGVGGAISFYDDGPAVDVTAVASSVRLDETNAFTGGTPGSFPI
TATSADPVLSFTSDFGADGAAASGATTYGLSIVGDGATLLKTAVGDQAITLVQTSATTIT
GQYGAGLTAFTVSIGADGKLTVTQSVALEHTTDGGTATDHNDALTLNGLINASVTVTDAD
GDTATDSIGVGGAISFYDDGPAVDVTAVASSVSLDETNAFTGGTPGSFPITATSADPVLS
FTSDFGADGAAASNATTYGLSIVGDGATLLKTAVGDQAITLVQTSATTITGQYGAGLTAF
TVSIGADGKLTVTQSVALEHTTDGGTAADHNDALTLNGLINASVTVTDADGDTATDSIGV
GGAISFYDDGPAVDVTAVASSVRLDETNAFTGGTPGSFPITATSADPVLSFTSDFGADGA
AASGATTYGLSIVGDGATLLKTAVGDQAITLVQTSATTITGQYGAGLTAFTVSIGADGKL
TVTQSVALEHTTDGGTAADHNDALTLNGLINASVTVTDADGDTATDSIGVGGAISFYDDG
PRVISPDAAVLSDAVGQSQWFGLDRDDSVTDNYGADGGTVRFSSDLSSYPALTSGLQPIS
YSLSPDGLVLTASTSAGTVFTVTLDPGNAQYQVNMIGTVDGGVTTIDFNQPGLYNFTGGN
AAWAGFNTLANDDSNDLLITPMIKTGEVYASGSTVNTNATSGGVGAGGSVGTGEAIRIDF
VTDLTGDPVSGKPYVAGDPTHDFEGHYTTNGASALFLGISGSNPTSKVRIRAYDDNDGDN
VVGDGVQDSITAVGVTYNGQSLLVSVASIGTAATSYTIGGKTFTVQFIDVDPTDATKYEV
TIDGVAGGSKDGTQIATYTATGYSSLEYYHDGGQPFSVGDFGATTINEGTPVSFGLPIEV
VDNDGDFASTQINVTLMPEGLPTADYSSSTTGVDEEATATSPNIIGSSHDDSLTGDEADN
VLYGGAGGDVLAGEGGNDYLIGGDGDDELTGGLGNDILDGGVGADTFKWSLADVGAGAVP
TDTIKDFDTAAYGDGGDRLDLGDLLEGLSATNESLDNYLDFSYDSATNSTTISVHSGGSG
TPVDQVVVLENVDLTNGGALTSDLAIISDLMTKGKLITD
NT seq
8580 nt
NT seq
+upstream
nt +downstream
nt
atggcacaagcgattgcggtagtcgtggcggtcacgggcagggcgttcgcacgcgacgcg
gagggtaacctgcgtgcgcttaaggcgggtgacacgctgaaggaaggcgaagtggtcatc
accatgtccggcggcagcgtcgagctggccatgtccgacggcgctccgatgacggtggct
gccgaccagaccgtgacgctcactgccgatgtctccgagaccacccgcccggcgcgtgag
gatgccgagatcatccaggggaccgtcgatcaggtgatccaggccctcgagcgtggcgcc
gacatcgaggatctcgaagagcccgcggccggtctcagcggcggtggcggcggcgaaggc
aacaacttcgtgcgcctgctgcggatcaccgaaggggtcacgccgctcgagttcgattac
cgcctgttgagcaccgagcgtctcgagccggaagagcgcgggctgcccgccgaagaggag
gagccggtcaacgcgacggtcacgctcagcgacctcatcgtgttcgaaggctccggcacc
gcgaccatcaccgcgaccgtcagcagccccgtcactggcagcgacctcgtcatcgagctc
agcaacggcgcggtcatcgtcatcccggtcggctcgaccaccggcacctcgacgcccttc
ccgatccagggcgaagacccctacatcgatcccgagaccatcaccatcgaggtcgtcgac
accggcggcagcgacttcggcaccgtgaccccgaccggcccggccacggtcgaggtgcgc
gacaccatcgacagcaccaacacctcgctcacggtcacgctcgaagcggccccgtcgctc
accgaggacggcaccacgctcacctacgtcgtcacgctcgacgcgccggtgcgcccgggc
gacgacccggtcagggtcagcttcatcgacctggcgggcaacccgcagacgatcaccatc
accgaaggcacgagcgccttcctcgacgtgctgattccggaagcgctgttcgaggatgtg
tacaaagaagcggatgcgatgctgccggtcgcgaccaacgtcgtgctgacgggcgggtcg
gacttcgaggcgctcgatccgcctgtggtcgggagtgtgacgctggtcgatacgatcgat
acgaccacggtcacgctgggcgacgtcacggtcgccgagggcagcggcacggcgacgatc
acggcgacggtgagcaacccggtgaccggcaacgcgctggtgatcacgctgtcgaacggg
gccacggtgacgatcccggtgggccagagttcggcggtctcgacgccgttcgcggtgcag
ggcgacgatccgtacctggatgccgagagctacgcggtcagcatcaccggcgcggcgggc
ggcaactacgaggcgctcgacaccagcgacacggccacggtcacgatcgacgacacgacg
aacacgaccacggtgacgctgggcgacgtcgcggtcgccgagggcagcggcacggccacg
atcacggcgacggtgagcaacccggtgaccggcagcgcgctggtgatcacgctgtcgaac
ggggccatggtgacgatcccggtgggccagagttcggcggtctcgacgccgttcgcggtg
cagggcgacgatccgtacctggatgccgagagctacgcggtcagcatcaccggcgcggcg
ggcggcaactacgaggcgctcgacaccagcgacacggccacggtcacgatcgacgacacg
acgaacacgatcacggtgacgctgggcgacgtcgcggtcgccgagggcagtggcacggcc
acgatcacggcgacggtgagcaacccggtgaccggcagcgcgctggtgatcacgctgtcg
aacggggccacggtgacgattccggtgggcgagagttcggcggcctcgacgccgttcgcg
gtgcagggcgacgatccctatgtcgaccccgaaagctacacggtcagcatcgccggcacg
gcgggcggcaactacgaggcgctcgacaccagcgacacggccacggtcaccatcgacgac
acggaagacacgactatcgtcatgctcgacgcatcgagcgaggtgcccgaactgggtgga
acgatcacttacaccgcctctgtggccgacgctccgctcggtactccgttgaccatcagt
ttgtcgaacggtgccgagatcgtgatcccggttggcagcctttctggctcgaccactgtc
ccgatgaccaaagctgacctcgaggcgatctcgggggacagcgtgacggtgaccatcacc
gacgccaccggtggcacgtatgaggcgctcgatacctccgacgatgcggtgacccgcata
gaccgggtcgtcgaggtcgagggcgattcgctcgccttgaacgaggcggatctcgtcggt
gcaggtggcaccctcacaccggtcacggcacagggcagcttcgtcatcaccgcgcccgat
ggcgtcgggtcgctgacgatccagaacctgacgatcggtgacatgcaggtgatcgtcgac
ggcgtcttcacgccgacctcggcgacaactccgctcggcaacaccctggctgtcacagcg
ttcgacccggctaccggcaccatcacttacagctacgagctgaatgcggccgagacgcat
acgcagccgaccaacgataccgagctggtcgagcagttcggcgtagtggtgacggatggc
gatccggtggatccgaacgtcgcaagctccctgctgacagtgaccatcaccgacgatcgc
cccgttgtcgagatccaggagcttgggagttcggtcagcctggacgagacgaacgccttc
accggcggtacgccgggcagcttcccgatcacggcgacgagcgccgatccggtgctgtcc
ttcacgtccgacttcggtgcggacggggcggcggcgagcaacgccacgacctacggcctg
tcgatcgtgggcgacggcgcgacgctgctcaagaccgcggtgggcgaccaggcgatcacg
ctggtgcagaccagcgcgaccacgatcaccggccagtacggcgcgggtctgacggccttc
accgtgtcgatcggggccgacggcaagctgacggtgacgcagagcgtcgcgctcgagcac
accacggacggcggcacggcggcggatcacaacgatgcgctcacgctgaacggcctgatc
aacgcgtcggtcaccgtgaccgatgccgatggcgacaccgcgaccgacagcatcggcgtc
ggcggcgcgatcagcttctatgacgacggtccggcggtcgatgtgaccgcggtggccagt
tcggtcagcctggacgagacgaacgccttcaccggcggtacgccgggcagcttcccgatc
acggcgacgagcgccgatccggtgctgtccttcacgtccgacttcggtgcggacggggcg
gcggcgagcaacgccacgacctacggcctgtcgatcgtgggcgacggcgcgacgctgctc
aagaccgcggtaggcgaccaggcgatcacgctggtgcagaccagcgcgaccacgatcacc
ggccagtacggcgcgggtctgacggccttcaccgtgtcgatcggggccgacggcaagctg
acggtgacgcagagcgtcgcgctcgagcacaccacggacggcggcacggcggcggatcac
aacgatgcgctcacgctgaacggcctgatcaacgcatcggtcaccgtgaccgatgccgat
ggcgacaccgcgaccgacagcatcggcgtcggcggcgcgatcagcttctatgacgacggt
ccggcggtcgatgtgaccgcggtggccagttcggtccgcctggacgagacgaacgccttc
accggcggtacgccgggcagcttcccgatcacggcgacgagcgccgatccggtgctgtcc
ttcacgtccgacttcggtgcggacggggcggcggcgagtggcgccacgacctacggcctg
tcgatcgtgggcgacggcgcgacgctgctcaagaccgcggtaggcgaccaggcgatcacg
ctggtgcagaccagcgcgaccacgatcaccggccagtacggcgcgggtctgacggccttc
accgtgtcgatcggggccgacggcaagctgacggtgacgcagagcgtcgcgctcgagcac
accacggacggcggcacggcgacggatcacaacgatgcgctcacgctgaacggcctgatc
aacgcgtcggtcaccgtgaccgatgccgatggcgacaccgcgaccgacagcatcggcgtc
ggcggcgcgatcagcttctatgacgacggtccggcggtcgatgtgaccgcggtggccagt
tcggtcagcctggacgagacgaacgccttcaccggcggcacgccgggcagcttcccgatc
acggcgacgagcgccgatccggtgctgtccttcacgtccgacttcggtgcggacggggcg
gcggcgagcaacgccacgacctacggcctgtcgatcgtgggcgacggcgcgacgctgctc
aagaccgcggtgggcgaccaggcgatcacgctggtgcagaccagcgcgaccacgatcacc
ggccagtacggcgcgggtctgacggccttcaccgtgtcgatcggggccgacggcaagctg
acggtgacgcagagcgtcgcgctcgagcacaccacggacggcggcacggcggcggatcac
aacgatgcgctcacgctgaacggcctgatcaacgcgtcggtcaccgtgaccgatgccgat
ggcgacaccgcgaccgacagcatcggcgtcggcggcgcgatcagcttctatgacgacggt
ccggcggtcgatgtgaccgcggtggccagttcggtccgcctggacgagacgaacgccttc
accggcggtacgccgggcagcttcccgatcacggcgacgagcgccgatccggtgctgtcc
ttcacgtccgacttcggtgcggacggggcggcggcgagcaacgccacgacctacggcctg
tcgatcgtgggcgacggcgcgacgctgctcaagaccgcggtaggcgaccaggcgatcacg
ctggtgcagaccagcgcgaccacgatcaccggccagtacggcgcgggtctgacggccttc
accgtgtcgatcggggccgacggcaagctgacggtgacgcagagcgtcgcgctcgagcac
accacggacggcggcacggcggcggatcacaacgatgcgctcacgctgaacggcctgatc
aacgcatcggtcaccgtgaccgatgccgatggcgacaccgcgaccgacagcatcggcgtc
ggcggcgcgatcagcttctatgacgacggtccggcggtcgatgtgaccgcggtggccagt
tcggtccgcctggacgagacgaacgccttcaccggcggtacgccgggcagcttcccgatc
acggcgacgagcgccgatccggtgctgtccttcacgtccgacttcggtgcggacggggcg
gcggcgagtggcgccacgacctacggcctgtcgatcgtgggcgacggcgcgacgctgctc
aagaccgcggtgggcgaccaggcgatcacgctggtgcagaccagcgcgaccacgatcacc
ggccagtacggcgcgggtctgacggccttcaccgtgtcgatcggggccgacggcaagctg
acggtgacgcagagcgtcgcgctcgagcacaccacggacggcggcacggcgacggatcac
aacgatgcgctcacgctgaacggcctgatcaacgcgtcggtcaccgtgaccgatgccgat
ggcgacaccgcgaccgacagcatcggcgtcggcggcgcgatcagcttctatgacgacggt
ccggcggtcgatgtgaccgcggtggccagttcggtcagcctggacgagacgaacgccttc
accggcggcacgccgggcagcttcccgatcacggcgacgagcgccgatccggtgctgtcc
ttcacgtccgacttcggtgcggacggggcggcggcgagcaacgccacgacctacggcctg
tcgatcgtgggcgacggcgcgacgctgctcaagaccgcggtgggcgaccaggcgatcacg
ctggtgcagaccagcgcgaccacgatcaccggccagtacggcgcgggtctgacggccttc
accgtgtcgatcggggccgacggcaagctgacggtgacgcagagcgtcgcgctcgagcac
accacggacggcggcacggcggcggatcacaacgatgcgctcacgctgaacggcctgatc
aacgcgtcggtcaccgtgaccgatgccgatggcgacaccgcgaccgacagcatcggcgtc
ggcggcgcgatcagcttctatgacgacggtccggcggtcgatgtgaccgcggtggccagt
tcggtccgcctggacgagacgaacgccttcaccggcggcacgccgggcagcttcccgatc
acggcgacgagcgccgatccggtgctgtccttcacgtccgacttcggtgcggacggggcg
gcggcgagtggcgccacgacctacggcctgtcgatcgtgggcgacggcgcgacgctgctc
aagaccgcggtaggcgaccaggcgatcacgctggtgcagaccagcgcgaccacgatcacc
ggccagtacggcgcgggtctgacggccttcaccgtgtcgatcggggccgacggcaagctg
acggtgacgcagagcgtcgcgctcgagcacaccacggacggcggcacggcggcggatcac
aacgatgcgctcacgctgaacggcctgatcaacgcatcggtcaccgtgaccgatgccgat
ggcgacaccgcgaccgacagcatcggcgtcggcggcgcgatcagcttctatgacgacggt
ccgcgcgtgatctccccggacgctgcggtactgtccgacgcggtcggccagagccaatgg
tttggtctcgaccgtgacgacagcgtgactgacaactatggtgccgatggcggtacggtg
cgcttcagttccgacctctccagctatcctgcactgacgtccgggctgcagccgatcagc
tattcgctctctcccgacggccttgttctgacggcgtccacgagtgccggtaccgtattc
acggtaacgctcgatccgggcaacgcgcagtatcaggtgaacatgatcgggacggtggat
ggcggtgtcacgacgatcgacttcaaccagccgggtttgtacaacttcacgggtggaaat
gccgcgtgggctgggttcaacacgcttgccaacgatgacagcaatgacctgctgattacc
ccgatgatcaagaccggcgaggtttatgcgagtggcagcacggtgaataccaacgccacg
agtggcggcgttggagcgggcggctccgtcggaacgggcgaagcgatccgaatcgatttc
gtgaccgatctgacgggtgacccggtctccggaaagccttacgtggccggggatccgacc
catgacttcgaggggcactacaccacgaacggcgcctccgcccttttcttgggcatctcc
ggatcgaacccgacgagcaaggtgcggattcgcgcttatgacgacaacgatggcgacaac
gtcgtcggggatggtgtgcaggattcgatcacggccgtcggcgtcacttacaacgggcag
agcctgctcgtatccgtcgcttccatcggcacggcggcaacgtcctacacgatcggcggc
aagacattcaccgtgcagttcatcgacgtcgatccgacggacgcaacgaagtacgaagtg
acgatcgatggcgtcgcggggggtagcaaagacgggacgcagatcgccacctacaccgcg
accgggtactcgagcctcgagtactaccacgatggcggtcagcctttcagcgtcggcgac
ttcggtgccacgaccatcaacgaagggacgcccgtcagcttcgggctgccgatcgaagtg
gtcgacaacgacggtgacttcgcttcgacgcagatcaacgtcaccttgatgccggaaggc
ttgccgacggccgattactcgtcgagcacgaccggcgtcgacgaagaggccactgcaacg
tcgccgaacatcatcggctcctcgcatgacgactcgctcacgggcgacgaggctgacaat
gttctgtatggcggggcaggtggggatgtgctggcaggcgagggcggcaacgactatctc
atcggcggcgacggcgacgacgaactgactggcggtctgggtaacgacatcctcgatggc
ggcgtcggcgccgacaccttcaagtggtcgctcgccgacgtgggtgcgggagcggtgccc
actgatacgatcaaggacttcgacaccgctgcctacggcgacggtggcgaccgcctcgat
ctgggcgatctgctggaaggtctgtcggcgaccaacgagagtctcgacaactacctcgac
ttctcctacgacagcgcgacgaactcgacgacgatctcggtgcattcgggcgggagcgga
acgccggtcgatcaggtcgtggtgctcgagaacgtggatctgaccaacggtggggcgctg
acctccgacctggcgatcatttccgacctcatgaccaagggcaagctcatcaccgactga
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