Thauera sp. GDN1: CKCBHOJB_01039
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Entry
CKCBHOJB_01039 CDS
T09925
Symbol
groL
Name
(GenBank) 60 kDa chaperonin
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
thag
Thauera sp. GDN1
Pathway
thag03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
thag00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CKCBHOJB_01039 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
thag03019
]
CKCBHOJB_01039 (groL)
03110 Chaperones and folding catalysts [BR:
thag03110
]
CKCBHOJB_01039 (groL)
03029 Mitochondrial biogenesis [BR:
thag03029
]
CKCBHOJB_01039 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
thag04147
]
CKCBHOJB_01039 (groL)
Enzymes [BR:
thag01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
CKCBHOJB_01039 (groL)
Messenger RNA biogenesis [BR:
thag03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
CKCBHOJB_01039 (groL)
Chaperones and folding catalysts [BR:
thag03110
]
Heat shock proteins
HSP60 / Chaperonin
CKCBHOJB_01039 (groL)
Mitochondrial biogenesis [BR:
thag03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
CKCBHOJB_01039 (groL)
Exosome [BR:
thag04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
CKCBHOJB_01039 (groL)
Exosomal proteins of other body fluids (saliva and urine)
CKCBHOJB_01039 (groL)
Exosomal proteins of breast cancer cells
CKCBHOJB_01039 (groL)
Exosomal proteins of colorectal cancer cells
CKCBHOJB_01039 (groL)
Exosomal proteins of bladder cancer cells
CKCBHOJB_01039 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
WEN41487
LinkDB
All DBs
Position
1142237..1143886
Genome browser
AA seq
549 aa
AA seq
DB search
MAAKEVKFGDSARERMVAGINILANAVKVTLGPKGRNVVLERSFGAPTVTKDGVSVAKEI
ELKDKFENMGAQMVKEVASKTSDIAGDGTTTATVLAQSIVREGMKFVAAGMNPMDLKRGI
DKAVVATIEELKKLSKPCSTNKEIAQVGSISANSDSDIGEIIARAMDKVGKEGVITVEDG
KSLQNELDVVEGMQFDRGYLSPYFINNPDKQVAILEQPFVLLFDKKISNIRDLLPVLEQV
AKSGRPLLIIAEDVEGEALATLVVNNIRGILKTCAVKAPGFGDRRKAMLEDIAILTGGQV
IAEEVGLTLEKATLDDLGQAARIEVGKENTIIIDGAGQAERIEARVKQIRVQIEEATSDY
DREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGIVPGGGVALL
RARANLGGLKGDNHDQDAGIKIVLRAMEQPLREIVANAGDEASVVVNKVVEGSGNFGFNA
ATGEYGDMVEMGVLDPTKVTRTALQNAASVAGLMLTTDCMVGELAEDKPMGGMPDMGGMG
GMGGMGMGM
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atggcagctaaagaagtcaagtttggtgattccgcccgcgagcgcatggtcgccggcatc
aacatcctggccaacgcggtcaaggtgaccctgggcccgaagggccgcaacgtggtgctc
gagcgctcgttcggcgcccccaccgtgaccaaggacggcgtctcggtcgccaaggaaatc
gaactgaaggacaagttcgagaacatgggcgcgcagatggtcaaggaagtcgcttccaag
acctcggacatcgccggtgacggcaccacgaccgcgaccgtgctggcccagtcgatcgtg
cgcgaaggcatgaagttcgtcgccgccggcatgaacccgatggacctcaagcgcggcatc
gacaaggccgtcgtcgccaccatcgaagagctgaagaagctgtcgaagccgtgctcgacc
aacaaggaaatcgcccaggtcggttcgatctcggccaactcggacagcgacatcggcgag
atcatcgcccgtgcgatggacaaggtcggcaaggaaggcgtgatcaccgtcgaagacggc
aagtcgctgcagaacgaactcgacgtcgtcgagggcatgcagttcgaccgcggctacctg
tcgccctacttcatcaacaacccggacaagcaggtcgccatcctcgagcagcccttcgtc
ctgctgttcgacaagaagatctccaacatccgtgacctgctgccggtgctcgagcaagtc
gccaagtcgggccgtccgctgctgatcatcgccgaagacgtcgaaggcgaagcgctggcc
accctggtggtgaacaacatccgcggcatcctcaagacctgcgccgtcaaggctccgggc
ttcggcgatcgtcgcaaggccatgctcgaagacatcgccatcctgaccggcggccaggtc
atcgccgaggaagtcggcctgaccctcgagaaggctaccctggacgacctcggccaggcc
gcccgcatcgaagtcggcaaggaaaacaccatcatcatcgacggcgcgggccaggccgag
cgcatcgaagcccgcgtcaagcagatccgcgtgcagatcgaggaagccacctccgactac
gaccgcgagaagctgcaggagcgcgtggccaagctggccggcggtgtggccgtgatcaag
gtcggcgccgcgaccgaagtcgagatgaaggagaagaaggcccgcgtcgaggacgccctg
cacgccacccgcgctgcggtggaagagggcatcgtccccggcggcggcgtcgcgctgctg
cgcgcccgcgccaacctgggcggcctcaagggcgacaaccacgaccaggacgcgggcatc
aagatcgtgctgcgcgcgatggagcagccgctgcgcgagatcgtcgccaacgccggtgac
gaagcctcggtggtggtcaacaaggtcgtcgagggttcgggcaacttcggcttcaacgcc
gccaccggcgagtatggcgatatggtcgagatgggcgtgctggacccgaccaaggtcacc
cgcaccgcgctgcagaacgccgcgtccgtcgccggtctgatgctgaccaccgactgcatg
gtcggcgagctggccgaagacaagccgatgggtggcatgcccgacatgggcggcatgggt
ggcatgggcggcatgggcatgggcatgtaa
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