Thauera sp. GDN1: CKCBHOJB_01252
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Entry
CKCBHOJB_01252 CDS
T09925
Symbol
rluD
Name
(GenBank) Ribosomal large subunit pseudouridine synthase D
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
thag
Thauera sp. GDN1
Brite
KEGG Orthology (KO) [BR:
thag00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
thag03009
]
CKCBHOJB_01252 (rluD)
Enzymes [BR:
thag01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
CKCBHOJB_01252 (rluD)
Ribosome biogenesis [BR:
thag03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
CKCBHOJB_01252 (rluD)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
DMA
Arabinose_trans
RelA_RIS
Motif
Other DBs
NCBI-ProteinID:
WEN41686
LinkDB
All DBs
Position
1378124..1379107
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AA seq
327 aa
AA seq
DB search
MNERADYIPAALPADDADSCDAVTIPAELGGLRLDQALARLFPEHSRSRLQGWLRDGYIR
VDGASPDARRKVCGGEVVEIDAPPPPELAAELPEDIPLAPVYEDEHILVIDKPVGLVVHP
GSGNWSGTLLNALLHHDPALAAVPRAGIVHRLDKDTSGLMVVAKTLAAQTELVRQLQARS
VKRHYWALVQGQLGSGGTVDAPIGRHPTQRTRMAVVGNGRPAITHYLVVARFARCTLVEC
RLETGRTHQIRVHMAHIGHPLVGDPVYGQRRTGDAVLDRFPRQALHAFRLGLVHPHSGAA
MEWSVPMAADFAVLVDALRGRSSGGKE
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
gtgaatgaacgcgccgattatatcccagccgccctgcctgccgacgacgccgactcgtgc
gatgcggtgacgattccggccgagctgggcggcctgcgcctcgatcaggcgctggccagg
ctgtttccggaacactcgcgcagcaggctgcagggctggcttcgtgacggctacatccgt
gtcgacggcgcctctcccgatgcgcggcgcaaggtgtgtggcggcgaggtggtcgagatc
gacgcaccgccgccccccgagctcgccgccgagctgcccgaggacatccccctcgcaccc
gtgtatgaggacgagcatatcctcgtcatcgacaagccggtcggactggtggtgcatccg
ggcagcggcaactggagcggcaccctgctcaacgcgctgctgcatcacgaccccgcgctc
gccgctgtgccgcgcgccggcatcgtacaccggctcgacaaggacaccagcggcttgatg
gtggtggcgaagacgctggcggcgcagaccgagctcgtccgccagttgcaggcgcgcagc
gtgaagcgccactactgggccctggtgcagggccagcttggcagtggcggtaccgtggat
gcgccgatcggccgtcatccgacgcagcgcacccggatggcggtcgtcggcaacggccgc
ccggcgataacgcactacctagtggtcgcgcgcttcgctcgctgcacgttggtcgagtgc
cggctggagaccggccgcacccaccagatccgcgtgcatatggcgcatatcggtcatccg
ctggtaggcgatccggtctacggccagcggcgcacgggcgacgccgtgctcgaccgcttc
ccgcgccaggcgctgcatgccttccgtctcggcctggtccacccgcactccggcgccgcc
atggagtggagcgtgccgatggccgcggacttcgcggtgctggtcgatgcgctgcgcggc
cggagctcggggggaaaggaatga
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