Thauera sp. GDN1: CKCBHOJB_01286
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Entry
CKCBHOJB_01286 CDS
T09925
Symbol
truA
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
thag
Thauera sp. GDN1
Brite
KEGG Orthology (KO) [BR:
thag00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
thag03016
]
CKCBHOJB_01286 (truA)
Enzymes [BR:
thag01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
CKCBHOJB_01286 (truA)
Transfer RNA biogenesis [BR:
thag03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CKCBHOJB_01286 (truA)
Prokaryotic type
CKCBHOJB_01286 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
PD40
Motif
Other DBs
NCBI-ProteinID:
WEN41714
LinkDB
All DBs
Position
1409434..1410231
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AA seq
265 aa
AA seq
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MKRIVLGLEYAGDAFFGWQSQAHGRTVQDVLEAALAQIAAEPVRLHCAGRTDTGVHASAQ
VVHFDTRAQRPSSAWVRGVNALLPPAVVVRWSAEVGDDFHARYLASERQYRYILHNAPTR
PAMLAGRVGWFHLPLDEARMAAAAECLVGTHDFSSFRAAGCQARTPLRLMHEARVTRQGD
YLLFDFRANGFLHHMIRNLVGALVYVGKGRYPVVWMRELLAARDRSRAAPTFSPDGLYLC
GVTYPARWPLPGDGRIIALPQLPLV
NT seq
798 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgcatcgtgctcggcctcgaatacgccggtgatgccttcttcggctggcagagc
caggctcacggacgcaccgtgcaggacgtgctggaagccgcgctggcgcagatcgccgcc
gagccggtccgcctgcactgcgcgggtcgcaccgacaccggcgtgcatgccagcgcgcag
gtggtgcatttcgacacccgtgcacagcgtccgtcctcggcctgggtgcgcggcgtcaat
gcgctgctgccgccggcggtggtggtgcgctggtcggccgaggtcggagacgacttccat
gcccgctatctcgccagcgagcgccagtaccgctacatcctccacaacgccccgacgcgg
ccggcgatgctcgccgggcgggtggggtggttccacctgccgctcgacgaggcgcggatg
gcggcagcggccgaatgcctcgtcggcacgcacgatttctcgtccttccgtgccgcgggc
tgccaggccaggacgccgctgcggctgatgcacgaggcgcgggtcacgcgccagggcgat
tacctgttgttcgatttccgtgccaacggcttcctgcaccacatgatccgcaacctggtc
ggtgcgctggtctatgtcggcaaggggcgctatccggtggtgtggatgcgcgaactgctc
gccgcgcgcgaccgcagccgcgcggcgccgaccttctccccggacgggctctacctatgc
ggcgtgacctacccggcgcgctggccgctccccggcgatgggcgtatcatcgcgctgccc
cagctacccctcgtctga
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