Thauera sp. GDN1: CKCBHOJB_01304
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Entry
CKCBHOJB_01304 CDS
T09925
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
thag
Thauera sp. GDN1
Brite
KEGG Orthology (KO) [BR:
thag00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
thag03032
]
CKCBHOJB_01304 (gyrA)
03400 DNA repair and recombination proteins [BR:
thag03400
]
CKCBHOJB_01304 (gyrA)
Enzymes [BR:
thag01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
CKCBHOJB_01304 (gyrA)
DNA replication proteins [BR:
thag03032
]
Prokaryotic type
DNA Topoisomerases
CKCBHOJB_01304 (gyrA)
DNA repair and recombination proteins [BR:
thag03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CKCBHOJB_01304 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
WEN41732
LinkDB
All DBs
Position
1427903..1430557
Genome browser
AA seq
884 aa
AA seq
DB search
MTQFAKETLPISLEEEMRHSYLDYAMSVIVGRALPDARDGLKPVHRRVLFAMHELSNDWN
RAYKKSARIVGDVIGKYHPHGDIAVYDTIVRMAQDFSLRYMLVDGQGNFGSVDGDNAAAM
RYTEIRMARIGHELLADIDKETVDFGPNYDGSEKEPLVLPARIPNLLINGSAGIAVGMAT
NIPPHNLGEVVDACLKLLAEPDTDIEALIDIVQAPDFPTAALIYGLHGVREGYRTGRGRV
IMRARTHFEPIGKTDRQAIIVDELPYQVNKRTLQERMAELVNEKKIEGISEIRDESDKSG
MRLVIELKRGEMPEVVLNKLFKHTQLQDSFGMNMVALVDGKPRLLNLKQMLVCFLEHRRE
VVTRRTIFELRKARDRGHILEGLAVALSNVDEIIALIKAAPTPAEAKRGLMERTWRSPLV
EEMLSRALADSYRPEGLDAQFGLSEQGYRLSEAQAQAILELRLQRLTGLEQDKIVGEYRE
VMDIITDLLDILARPERITAIIVEELTAVRNQFGDPRRSELVMNTAEINIEDLITPEDMV
VTLSHTGYFKRQPLADYRAQRRGGRGKQATSMKDEDFIDHLFVANTHDTVLCFSSRGRCY
WLKVYEVPEGTRNSRGKPIVNLFPLIEGEKITAVLPIKEFDEEHFVFMATSEGTVKKTAL
TAFSNPRKAGIIAVNLDDGDHLIGVAITDGQCDVMLFSDAGKAVRFAETDVRPMGREARG
VRGMMLEDGQAVIAMLVAKDESQSVLTATENGYGKRTPVAEYTRHGRGTKGMIAIQTSDR
NGKLVGAVLVEPSDEVMLISTGGVLIRTSVESIREMGRSTQGVTLINLDEGTFLASIEKV
AESESDESMRASDEAAEGGAHAAAGEGSEGGEGEAPAAGEQGEA
NT seq
2655 nt
NT seq
+upstream
nt +downstream
nt
atgacccagttcgccaaggaaaccctgccgatcagcctcgaagaggagatgcgccactcc
tacctcgattacgcgatgagcgtgatcgtggggcgcgcgctccccgacgcccgcgatggc
ctcaagccggtgcaccggcgcgtgctgttcgcgatgcacgagctctccaacgattggaac
cgcgcctacaagaagtcggcgcgtatcgtcggcgacgtcatcggcaagtaccacccgcac
ggcgacatcgcggtgtacgacaccatcgtgcgcatggcgcaggacttctcgctgcgctac
atgctggtcgacggccagggcaacttcggctcggtcgacggcgacaacgccgcggccatg
cgttacaccgaaatccgcatggcgcgcatcggccacgagctgctggccgacatcgacaag
gagacggtcgacttcgggccgaactacgacggctcggagaaggagccgctggtcctgccc
gcgcgcatccccaatctgctgatcaacggctcggccggcatcgcggtgggcatggcgacc
aacatcccgccgcacaacctgggcgaggtcgtcgacgcctgcctgaagctgctggcggag
ccggataccgacatcgaggccctgatcgatatcgtccaggcgcccgacttcccgactgcc
gccctgatctatggcctgcatggcgtgcgcgagggctaccgcaccgggcgcgggcgcgtg
atcatgcgcgcgcgcacccacttcgagccgatcggcaagaccgaccgccaggcgatcatc
gtcgacgagctgccctaccaggtgaacaagcgcaccctgcaggagcgcatggccgagctg
gtcaacgagaagaagatcgagggcatcagcgagatccgcgacgagtccgacaagtcgggc
atgcgcctggtcatcgagttgaagcgcggcgagatgcccgaggtggtgctcaacaagctc
ttcaagcacacccagctgcaggacagcttcggcatgaacatggtggcgctggtcgacggc
aagccgcgcctcctcaacctcaagcagatgctggtgtgcttcctcgagcaccggcgcgag
gtcgtcacccgccgtaccattttcgaactgcgcaaggcgcgcgaccgcggccacatcctc
gaaggcctggcggtggcgctgtccaacgtcgacgagatcatcgccctgatcaaggccgcg
ccgacacccgccgaagccaagcgcgggctgatggagcgcacctggcgttcgccgctggtc
gaggagatgctgtcgcgcgcgttggccgacagctaccggccggaagggctggatgcgcag
ttcggcctctcggagcagggctaccgcctgtccgaagcccaggcccaggccatcctcgag
ctgcgcctgcagcgcctgaccggactcgaacaggacaagatcgtcggcgagtatcgcgag
gtgatggacatcatcaccgacctgctcgacatcctcgcccgccccgagcgcatcaccgcg
atcatcgtcgaggagctcaccgcggtgcgcaaccagttcggcgacccgcgccgctccgag
ctggtcatgaacaccgccgagatcaacatcgaggacctgatcacgccggaagacatggtc
gtgaccctgtcgcacaccggctacttcaagcgccagccgctcgccgactaccgcgcccag
cgccgcggcggccgcggcaagcaggcgacctcgatgaaggacgaggacttcatcgaccac
ctcttcgtcgccaacacgcacgacaccgtgctgtgcttctccagccgcgggcgctgctac
tggctcaaggtgtacgaggtgcccgaaggcacccgcaactcgcgcggcaagcccatcgtc
aatctcttcccgctgatcgaaggcgagaagatcaccgcggtgctgccgatcaaggagttc
gacgaggagcacttcgtgttcatggcgacctcggaaggcacggtcaagaagaccgcgctc
accgcgttctccaacccgcgcaaggctgggatcatcgcggtcaacctggacgacggcgac
cacctgatcggcgtggccatcaccgacggccagtgcgacgtgatgctgttctccgacgcc
ggcaaggcggtgcgcttcgccgaaaccgacgtgcgcccgatgggccgcgaggcccgcggc
gtgcgcggcatgatgctggaagacggccaggcggtgatcgccatgctggtggccaaggac
gagtcgcagtcggtgctgaccgcgaccgagaacggctatggcaagcgcacgccagtggcg
gaatacacccgccatggccgcggcaccaagggcatgatcgcgatccagaccagcgaccgt
aacggcaagctggtcggtgcggtgctggtcgagccctccgacgaggtgatgctgatctcg
accggcggcgtgctgatccgcaccagcgtcgagagcatccgcgagatgggacgctcgacc
cagggcgtgaccctgatcaacctcgacgagggcaccttcctcgccagcatcgagaaggtg
gccgagtccgagtcggacgagagtatgcgcgccagtgacgaggcggccgagggcggagcg
cacgctgcggcgggcgaggggagtgagggcggcgagggcgaggccccggccgccggcgag
caaggagaggcttga
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