Thauera sp. GDN1: CKCBHOJB_01356
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Entry
CKCBHOJB_01356 CDS
T09925
Symbol
kdsA
Name
(GenBank) 2-dehydro-3-deoxyphosphooctonate aldolase
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
thag
Thauera sp. GDN1
Pathway
thag00541
Biosynthesis of various nucleotide sugars
thag01100
Metabolic pathways
thag01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
thag00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
CKCBHOJB_01356 (kdsA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
thag01005
]
CKCBHOJB_01356 (kdsA)
Enzymes [BR:
thag01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
CKCBHOJB_01356 (kdsA)
Lipopolysaccharide biosynthesis proteins [BR:
thag01005
]
Lipid A
CKCBHOJB_01356 (kdsA)
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GFIT
Motif
Pfam:
DAHP_synth_1
Motif
Other DBs
NCBI-ProteinID:
WEN41781
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Position
1486255..1487094
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AA seq
279 aa
AA seq
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MNLCGFEVGLDKPIFLISGPCVAESEQMCLDIAGQMKEICAELGIPYIFKASYDKANRSS
GKSFRGHGMDAGLKMLEAVKKQLGLPVLTDVHTIEEIPLVASVVDVLQTPAFLCRQTDFI
HAVAASGKPVNIKKGQFLAPGDMKNVADKAREANGGADTIMVCERGASFGYNNLVSDMRS
LAIMRDTGCPVVFDATHSVQLPGGQGTASGGQREFVPVLARAAVAVGVAGLFMETHPDPA
KALSDGPNAWPLPKMKALLTTLKDIDTLVKRQGFLETTL
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atgaacctctgcggattcgaagtcggcctcgacaagccgatcttcctgatctccggcccc
tgcgtggccgagtccgagcagatgtgcctggacatcgccgggcagatgaaggaaatctgc
gccgagctgggcatcccctacatcttcaaggcctcgtacgacaaggccaaccgcagctcg
ggcaagagcttccgcggccacggcatggacgccggcctgaagatgctggaggcggtcaag
aagcagctcggcctgccggtgctgaccgacgtgcacacgatcgaggagatcccgctggtc
gcatccgtggtcgacgtgctgcagaccccggccttcctgtgccgccagaccgacttcatc
cacgcggtggcggccagcggcaagccggtgaacatcaagaagggccagttcctcgccccc
ggcgacatgaagaacgtcgccgacaaggcgcgcgaggccaacggcggcgccgacaccatc
atggtgtgcgagcgcggcgcctccttcggctacaacaacctcgtctccgacatgcgctcg
ctggcgatcatgcgcgacaccggctgtccggtggtgttcgacgccacccattcggtgcag
ctgccgggcgggcagggcacggcctcgggcggccagcgcgagttcgtgccggtgctggcg
cgcgccgcggtggcggtgggcgtcgcgggtctgttcatggagacccatccggacccggcg
aaggcgctctccgacggtcccaatgcctggccgctgccgaagatgaaggcgctgctgacc
acgctcaaggacatcgacaccctggtcaagcgccagggtttcctcgaaaccacgctttga
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