Thauera sp. GDN1: CKCBHOJB_01384
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Entry
CKCBHOJB_01384 CDS
T09925
Symbol
rluB
Name
(GenBank) Ribosomal large subunit pseudouridine synthase B
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
thag
Thauera sp. GDN1
Brite
KEGG Orthology (KO) [BR:
thag00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
thag03009
]
CKCBHOJB_01384 (rluB)
Enzymes [BR:
thag01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
CKCBHOJB_01384 (rluB)
Ribosome biogenesis [BR:
thag03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
CKCBHOJB_01384 (rluB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
DUF6494
Motif
Other DBs
NCBI-ProteinID:
WEN41808
LinkDB
All DBs
Position
1510270..1511427
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AA seq
385 aa
AA seq
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MPHKPNRPLRPPLKKKSDAIEILDRDPRESRSRRGEGAPRDEDAQPSRKDAHLSADPRGP
RTPRPQRAGGAAPAPRRPRIEGDPARHPEAHKSALGQPERGERPARGRGQGGRNAPTTLT
EPERLQKVLAQAGVASRREIEEWVVAGRISVNGLPASLGQKIGPGDRVKVNGKLIPLRFT
QRSPRVLIYHKPEGEIVSRDDPEGRPTVFERLPMLRKGRWLAVGRLDFNTSGLLLFTNDG
DLANKLMHPRYELEREYAVRILGELAEEQAKSLTEGIQLEDGPAKFNLLRDEGGEGANHW
YRVTISEGRNREVRRMFEAVGLTVSRLMRVRYGSVELPARLKRGMWMEMPEPEACALAGL
PPPQPSRQQDERAKRPVKLHRTQPR
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgcctcacaaaccgaaccggccgctgcgcccgcccctgaagaagaagtctgacgcgatc
gagatcctcgatcgcgacccgcgcgagtcgcgcagccgtcgtggcgaaggggctcctcgt
gacgaggacgcccagcccagccgcaaggatgcccatctcagcgccgatccgcgcggcccg
cgtacgccacggccgcagcgtgccggaggtgccgccccggcgccgcgccggccgcgcatc
gagggcgacccggcgcgccatcccgaggcgcacaagtccgcgctcggccagcccgagcgc
ggcgagcgtcccgcccgcggacgcggccagggcgggcgcaatgcgccgaccacgctgacc
gagcccgaacgcctgcagaaggtgctcgcccaggccggcgtcgcctcgcggcgcgagatc
gaggagtgggtggtcgccgggcgcatctcggtcaacggcctgccggcctcgctcggacag
aagatcggcccgggagaccgcgtcaaggtcaatggcaagctgatcccgctgcgcttcacc
cagcgctcgccgcgggtgctgatctaccacaagcccgagggcgagatcgtctcgcgcgac
gacccggagggcaggcccaccgtgttcgagcgcctgccgatgctgcgcaaggggcgctgg
ctggcggtcggtcgccttgacttcaacacctccggcctgctgctgttcaccaacgacggc
gacctcgccaacaagctgatgcacccgcgctacgaactcgagcgcgagtacgcggtgcgc
atcctcggcgagctggccgaggagcaggcgaagtcgctgaccgagggcatccagctcgag
gacgggccggcgaagttcaacctgctgcgcgacgagggcggcgagggtgccaaccactgg
taccgcgtgaccatctccgaaggccgcaaccgcgaggtgcggcgcatgttcgaggccgtc
ggcctgaccgtcagccggctgatgcgggtgcgctacggcagcgtcgagctgcctgcgcgc
ctcaagcgcggcatgtggatggagatgccggagcccgaggcctgcgcgctcgccggcctg
ccgccgccgcagccgagccggcagcaggacgagcgcgccaagcgcccggtcaagctgcat
cgcacccagccgcgctga
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