Thauera sp. GDN1: CKCBHOJB_01389
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Entry
CKCBHOJB_01389 CDS
T09925
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
thag
Thauera sp. GDN1
Brite
KEGG Orthology (KO) [BR:
thag00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
thag03016
]
CKCBHOJB_01389 (truB)
Enzymes [BR:
thag01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
CKCBHOJB_01389 (truB)
Transfer RNA biogenesis [BR:
thag03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CKCBHOJB_01389 (truB)
Prokaryotic type
CKCBHOJB_01389 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
TruB_C
TPR_Slam
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
WEN41813
LinkDB
All DBs
Position
1516932..1517918
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AA seq
328 aa
AA seq
DB search
MTASPAPEAAALAPRAKRPKQPQRKIVRRAVDGVLLLDKPQGMSSNGALQTARRLLNAAK
AGHTGTLDPMASGLLPLTFGEATKFSQMLLDADKTYEAVVQLGVETDSGDAEGKVLATHP
VAVDRAALEAVLERFRGEIEQVPPMYSALKRDGKALYEYARQGIELEREARRVTIRALDL
LDFAGERFAMRVHCSKGTYIRSLAMDIGAALGCGAHLAALRRTAIGGFDLAGAVSLEALE
AAGEGGRDALLAPVDALVADFPVLNLDEDAARGLLQGRTLALPGACPGERVRAYGPAGFL
GLAQWQDDGRLAARRLIATGGLAEAPCA
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgacggcaagccccgcgcctgaggctgcggcgcttgcgccgcgggcgaaacgcccgaag
cagccgcagcgcaagatcgtccgccgcgcggtcgatggcgtgctgctgctcgacaagcca
cagggcatgagctcgaacggtgcgctgcagaccgcgcgccgcctgctcaacgccgccaag
gccggtcacaccggcaccctcgatccgatggcgagcgggctgttgccgctcaccttcggc
gaggccaccaagttctcgcagatgctgctcgacgccgacaagacctacgaggcggtggtg
cagctcggcgtggaaaccgacagcggcgacgccgaaggcaaggtcctcgcgacccatccg
gtggcggtcgatcgcgcggcgttggaggccgtgctcgagcgcttccgcggagagatcgag
caggtgccgccgatgtattcggcgctcaagcgcgacggcaaggcgctctacgaatatgca
cgccagggcatcgagctcgagcgcgaggcgcgccgggtcacgatccgtgcgctggacttg
ctcgacttcgccggcgagcgcttcgccatgcgtgtgcattgcagcaagggcacctacatc
cgcagcctggcgatggacatcggcgccgcgctcggttgcggggcccacctcgcggccttg
cgccggaccgcgatcggcggtttcgatctggcgggcgcggtgagcctggaagccctcgag
gcggccggggagggcgggcgcgatgcactgctcgcgccggtcgatgcgctggtcgcggac
ttcccggtgctgaacctggacgaggacgctgcgcgtggcctgctgcaggggcgtacgctg
gcgctgcccggcgcctgccccggcgagcgggtgcgcgcatacggacccgcgggctttctg
gggctggcgcaatggcaggacgacggacgcctcgccgcgcgccgcctgatcgccaccggt
ggcctcgccgaggcgccatgcgcatga
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