Thauera sp. GDN1: CKCBHOJB_01420
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Entry
CKCBHOJB_01420 CDS
T09925
Symbol
rlmE
Name
(GenBank) Ribosomal RNA large subunit methyltransferase E
KO
K02427
23S rRNA (uridine2552-2'-O)-methyltransferase [EC:
2.1.1.166
]
Organism
thag
Thauera sp. GDN1
Brite
KEGG Orthology (KO) [BR:
thag00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
thag03009
]
CKCBHOJB_01420 (rlmE)
Enzymes [BR:
thag01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.166 23S rRNA (uridine2552-2'-O)-methyltransferase
CKCBHOJB_01420 (rlmE)
Ribosome biogenesis [BR:
thag03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
CKCBHOJB_01420 (rlmE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FtsJ
Methyltransf_31
Methyltransf_23
Methyltransf_25
GCD14
Reovirus_L2_MT1
Motif
Other DBs
NCBI-ProteinID:
WEN41844
LinkDB
All DBs
Position
1555179..1555802
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AA seq
207 aa
AA seq
DB search
MKKNKTSRAWVHDHVNDPWVQRAQAEGYRARAAYKLLEIDERDHLLKPGAVVVDLGAAPG
SWCQVAVKRCGPKGRVFALDLLPMEAVAGVDFLLGDFTEDSVLEALEARLEGARVDVVLS
DMAPNLTGVATVDQARSIHLCELALDFAVRHLKPGGQFVIKVFQGEGFMEYRKQLDAAFT
SVQVRKPKASRDRSAEVYLVAKGPRRA
NT seq
624 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagaacaagaccagtcgtgcctgggtgcacgaccatgtgaacgacccctgggtg
cagcgcgcccaggccgagggctatcgcgcgcgcgcggcttacaagctgctcgagatcgac
gagcgcgaccatctgctcaagccgggcgcggtggtggtcgacctcggcgcggcgccgggc
tcgtggtgccaggtcgcggtcaagcgctgcgggccgaaggggcgggtgttcgcgctcgac
ctgctgccgatggaagcggtggccggggtggatttcctgctcggcgacttcaccgaggac
agcgtgctcgaggcgctcgaggcgcggctcgagggcgcccgcgtcgacgtggtcctgtcc
gacatggcgccgaacctgaccggggtggcgacggtcgaccaggcgcgctccatccacctg
tgcgagctggcgctggatttcgcggtccgccacctgaagccgggcgggcagttcgtgatc
aaggtcttccagggcgagggcttcatggaatacaggaagcaactggatgccgcgttcacc
tcggtgcaggtgcgcaagcccaaggcctcgcgcgatcgcagcgccgaggtctatctcgtc
gccaagggcccgcgccgcgcctga
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