Thauera sp. GDN1: CKCBHOJB_01620
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Entry
CKCBHOJB_01620 CDS
T09925
Symbol
trmA
Name
(GenBank) tRNA/tmRNA (uracil-C(5))-methyltransferase
KO
K00557
tRNA (uracil-5-)-methyltransferase [EC:
2.1.1.35
]
Organism
thag
Thauera sp. GDN1
Brite
KEGG Orthology (KO) [BR:
thag00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
thag03016
]
CKCBHOJB_01620 (trmA)
Enzymes [BR:
thag01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.35 tRNA (uracil54-C5)-methyltransferase
CKCBHOJB_01620 (trmA)
Transfer RNA biogenesis [BR:
thag03016
]
Prokaryotic type
tRNA modification factors
Methyltransferases
CKCBHOJB_01620 (trmA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_25
Methyltransf_31
Methyltransf_12
Methyltransf_11
Methyltransf_15
MTS
Methyltransf_4
DREV
PrmA
Motif
Other DBs
NCBI-ProteinID:
WEN42035
LinkDB
All DBs
Position
complement(1766268..1767374)
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AA seq
368 aa
AA seq
DB search
MPLPDIDPARYEEQLAAKLARYRADFAEFALPEPAVFRSAPLHYRLRAEFRLWHHEGRID
YAMFDSADPKQPILLETFPAAAEPIATLMPRLRDALQASEPLRRKIFQVEFLATLSGECL
VSLVYHRPLDEAWEAAARELAAALDIRLIGRSRKQKLVLERDWVQEELEVDGARLRYQQF
EGSFTQPNGGVNQHMLSWARAQAKSVGAAPQGAGDLLELYCGNGNFTVALAPLFGRVLAT
EMSKTSVRAAHTNLADNGVDNVTMVRMASEEISDALAGGREYRRMAGVDLAGYRFSTLFV
DPPRAGLDDGTIALARGFDNILYISCNPETLRANVAALSETHRIAAAAAFDQFPYTHHLE
CGLLLQRR
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atgcccctgcccgacatcgaccccgcccgctacgaggagcagctcgccgccaagctcgcg
cgctaccgcgccgacttcgccgagttcgcgctgcccgagcccgcggtcttccgctccgcg
ccgctgcactaccgcctgcgcgccgagttccgcctgtggcaccacgaaggccgcatcgac
tacgcgatgttcgacagcgccgacccgaagcagcccatcctgctcgagaccttccccgcc
gccgcagaacccatcgccaccctgatgccgcgcctgcgcgacgcgctccaggcgagcgaa
ccgctgcggcgcaagatcttccaggtcgagttcctcgccaccctgagcggcgagtgcctg
gtcagcctggtctaccaccgcccgctcgacgaggcctgggaggccgcagcacgggagctc
gccgcggcgctggacatccggctcatcggccgcagccgcaagcagaagctcgttctcgag
cgcgactgggtgcaggaggagctggaggtcgacggcgcgcgcctgcgctaccagcagttc
gaaggcagcttcacccagcccaacggcggcgtgaaccagcacatgctgtcctgggcgcgc
gcgcaggcgaagagcgtgggcgctgccccgcaaggcgcgggcgacctgctcgaactctac
tgcggcaacggcaacttcaccgtcgcgctggcgccgctgttcggccgcgtgctcgccacc
gagatgagcaagacctcggtgcgcgccgcgcacaccaacctcgccgacaacggcgtggac
aacgtcaccatggtgcgcatggcgagcgaggagatcagcgacgcgctggccggcggccgc
gaataccgccgcatggcgggcgtcgatctcgcgggctaccgcttctccacgctcttcgtc
gacccgccgcgcgccggcctggatgacggcacgatcgcgctggccagaggcttcgacaac
atcctctacatctcctgcaacccggagaccctgcgcgccaacgtcgccgcgctgtcggag
acacaccgcattgcggcagcggcggccttcgaccagttcccctacacccaccacctcgag
tgcgggctgctgctgcagcggcgctga
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