KEGG   Thauera sp. GDN1: CKCBHOJB_01641
Entry
CKCBHOJB_01641    CDS       T09925                                 
Symbol
orn
Name
(GenBank) Oligoribonuclease
  KO
K13288  oligoribonuclease [EC:3.1.-.-]
Organism
thag  Thauera sp. GDN1
Pathway
thag03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:thag00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    CKCBHOJB_01641 (orn)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:thag03019]
    CKCBHOJB_01641 (orn)
   03009 Ribosome biogenesis [BR:thag03009]
    CKCBHOJB_01641 (orn)
Messenger RNA biogenesis [BR:thag03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     CKCBHOJB_01641 (orn)
Ribosome biogenesis [BR:thag03009]
 Eukaryotic type
  Pre-60S particles
   RNases
    CKCBHOJB_01641 (orn)
SSDB
Motif
Pfam: RNase_T HGTP_anticodon2 pP_pnuc_1
Other DBs
NCBI-ProteinID: WEN42056
LinkDB
Position
1795418..1795966
AA seq 182 aa
MAQDPKTLIWLDMEMTGLEPDRDRIIEIAIVLTNEALETIAEAPVITVHQPDSVLDAMDE
WNRNTHGKSGLIERVKVSAVSEAEAEAQALAFLQQWVPARTSPMCGNSVCQDRRFLARWM
PALENWFHYRNLDVSTVKELARRWCPEIYEGVKKAGSHTALADIHESIAELRHYRDHFLR
LE
NT seq 549 nt   +upstreamnt  +downstreamnt
atggcacaggacccgaagacgctgatatggctggacatggagatgaccggcctcgaaccc
gaccgtgaccgcatcatcgagatcgcgatcgtgctgaccaacgaggcgctggaaaccatc
gccgaggcgccggtgatcaccgtgcatcagcccgacagcgtgctcgacgcgatggacgag
tggaaccgcaacacccacggcaagtccgggctgatcgagcgcgtgaaggtgtccgccgtg
tccgaggcggaggccgaggctcaggcgctggccttcctgcagcagtgggtgccggcgcgg
acctcgccgatgtgcggcaactcggtgtgccaggaccgccgcttcctcgcgcgctggatg
ccggcgctggagaattggttccactaccgcaacctcgacgtgtccaccgtcaaggaactc
gcccggcgctggtgtccggagatctacgagggcgtcaagaaggcgggcagccataccgcg
ctggccgacatccacgagtcgatcgccgaactacgccactaccgcgaccacttcctgcgc
ctcgagtaa

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