Thauera sp. GDN1: CKCBHOJB_01807
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Entry
CKCBHOJB_01807 CDS
T09925
Symbol
lptB_5
Name
(GenBank) Lipopolysaccharide export system ATP-binding protein LptB
KO
K01995
branched-chain amino acid transport system ATP-binding protein
Organism
thag
Thauera sp. GDN1
Pathway
thag02010
ABC transporters
thag02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
thag00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
CKCBHOJB_01807 (lptB_5)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CKCBHOJB_01807 (lptB_5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
thag02000
]
CKCBHOJB_01807 (lptB_5)
Transporters [BR:
thag02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
CKCBHOJB_01807 (lptB_5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
BCA_ABC_TP_C
AAA_21
AAA_30
AAA_23
AAA_29
AAA_25
MMR_HSR1
FeoB_N
RsgA_GTPase
TsaE
Motif
Other DBs
NCBI-ProteinID:
WEN42222
LinkDB
All DBs
Position
complement(1982817..1983590)
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AA seq
257 aa
AA seq
DB search
MITLLEARSIGKRFGGLQALSDVSLTIRKGEVYGLIGPNGAGKTTFFNVLTGAYTPDGGE
FVFNGSLLPTGKPHKVVGRGIARTFQNIRLFRDLTALENVMAGHHIRTRAGVWGVLLQSR
FTREEERLTTERAYELLRYVGIERFADVVSKNLSYGDQRRLEIARALATEPQLLALDEPA
AGMNATETGQLKQLIQQIRNDGITVMLIEHDVKLVMGLCDRVAVLDFGKKIAEDVPAVVQ
KDDAVIAAYLGGGKHAH
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
gtgatcaccctgctcgaggcccgcagcatcggcaagcgcttcggcggcctgcaggcgctc
tccgacgtctcgctgaccatccgcaagggcgaggtctatggcctgatcggccccaacggc
gccggcaagaccaccttcttcaacgtgctcaccggcgcctacacgcccgacggcggcgag
ttcgtgttcaacggcagcctgctgcccaccggcaagccgcacaaggtcgtcggccgcggc
atcgcccgcaccttccagaacatccgcctgttccgcgacctcaccgcgctcgagaacgtc
atggccggccaccacatccgcacccgggccggcgtgtggggcgtgctgctgcagagccgc
ttcacccgcgaggaggagcgcctgactaccgagcgcgcctacgagctgctgcgctatgtc
ggcatcgagcgcttcgccgacgtggtgtccaagaacctgtcctacggcgaccagcgccgg
ctcgagatcgcgcgcgcgctcgccaccgaaccgcagctgctggcgctcgacgaacccgcc
gccggcatgaacgccaccgagaccgggcagctcaagcagctcatccagcagatccgcaat
gacggcatcaccgtgatgctgatcgagcacgacgtgaagctggtgatgggcctgtgcgac
cgcgtcgcggtgctcgacttcggcaagaagatcgccgaggacgtgcccgcggtggtgcag
aaggacgacgcggtgattgccgcctacctgggcggaggcaagcatgcacactga
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