Thauera sp. GDN1: CKCBHOJB_01841
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Entry
CKCBHOJB_01841 CDS
T09925
Symbol
uvrB
Name
(GenBank) UvrABC system protein B
KO
K03702
excinuclease ABC subunit B
Organism
thag
Thauera sp. GDN1
Pathway
thag03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
thag00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CKCBHOJB_01841 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
thag03400
]
CKCBHOJB_01841 (uvrB)
DNA repair and recombination proteins [BR:
thag03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CKCBHOJB_01841 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CKCBHOJB_01841 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
AAA_18
Kinesin
Microtub_bd
Motif
Other DBs
NCBI-ProteinID:
WEN42254
LinkDB
All DBs
Position
2019511..2021598
Genome browser
AA seq
695 aa
AA seq
DB search
MTSQGNSGANDAPQQGGTVISFEGSPFRLHQPFPPAGDQPEAIRLLCEGLEDGLMYQTLL
GVTGSGKTYTMANVIARMGRPALVLAPNKTLAAQLYAEFKEFLPENAVEYFVSYYDYYQP
EAYVPSRDLFIEKDSSINEHIEQMRLSATKSLMERRDVVIVATVSCIYGIGDPVDYHAMI
LHLREGERMAHRDLIQRLVAMQYTRADIDFRRGTFRVRGDVIDVFPAENAELAVRIEMFD
DEIEHLTLFDPLTGHLKHKLARFTVYPSSHYVTPRATVLQAIEAIKEELKERIAFFQREG
KLVEAQRIEQRTRFDLEMLNEMGFCKGIENYSRHLSGRGPGEPPPTLIDYLPQDALLFID
ESHVAIGQVGGMYKGDRSRKENLVGYGFRLPSALDNRPLKFDEFERLMPQTVFVSATPAK
YEEEHQGQVVEQVVRPTGLIDPLVEVRPAMTQVDDLLGEIKKRLAVNERVLVTVLTKRMA
EDLTDYLADNGIRVRYLHSDIDTVERVEIIRDLRLGEFDVLVGINLLREGLDIPEVSLVA
ILDADKEGFLRSERSLIQTIGRAARHLHGTAILYADRITDSMKAAIGETERRRQKQIAFN
EANGIVPKSVTKRIKDIIDGVYDADGARRDVARVAEKGADYAVMDEKALARAIKRLEKEM
QEHARNLEFEKAAAARDELFKLRQRAFGADQHGSV
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atgacgagtcaaggcaatagcggcgcaaacgatgcaccgcagcaaggcgggacggtgatc
tccttcgagggcagccccttccgcctgcaccagccttttccgcccgccggcgaccagccc
gaggcgatccgcctgctgtgcgaagggttggaggacggcctgatgtaccagaccctgctc
ggcgtgaccggctcgggcaagacctacaccatggccaacgtcatcgcccgcatggggcgg
ccggcgctggtgctggcgccgaacaagacactcgctgcgcagctctacgccgagttcaag
gagttcctgcccgagaacgcggtcgagtatttcgtcagctactacgactactaccagccc
gaggcctacgtgccctcgcgcgacctcttcatcgagaaggattcgtcgatcaacgagcac
atcgagcagatgcggctgtcggcgacgaagagcctgatggagcgccgcgacgtggtgatc
gtggcgacggtgtcgtgcatttacggcatcggcgacccggtcgactaccacgccatgatc
ctgcacctgcgcgagggcgagcgcatggcgcaccgcgacctcatccagcgcctggtggcg
atgcagtacacccgcgccgacatcgacttccgccgcggcaccttccgcgtgcgcggcgac
gtgatcgatgtcttccccgcggaaaacgccgagctcgcggtgcgcatcgagatgttcgac
gacgagatcgagcacctgacgctgttcgatccgctcaccgggcatctgaagcacaagctg
gcgcgcttcaccgtgtatccgtccagccactacgtcaccccgcgcgccaccgtgctgcag
gcgatcgaggcgatcaaggaagagctgaaggagcgcatcgccttcttccagcgcgagggc
aagctggtggaggcgcagcgcatcgagcagcgcacccgcttcgacctcgagatgttgaac
gagatgggcttctgcaagggcatcgagaactactcgcgccatctgtcgggtcgcggtccg
ggcgagccgccgccgaccctgatcgactacctgccgcaggacgcgctgctgttcatcgac
gagtcgcacgtcgccatcggccaggtcggcggcatgtacaagggcgaccgctcgcgcaag
gagaacctggtcggctacggcttccgcctgccctccgcgctggacaaccggccgctcaag
ttcgacgagttcgagcgcctgatgccgcagaccgtgttcgtctccgccacgccggcgaag
tacgaggaggagcaccagggccaggtggtggaacaggtggtgcgcccgaccggcctgatc
gacccgctggtcgaggtgcgcccggcgatgacgcaggtggatgacctgctcggcgagatc
aagaagcgcctggcggtgaacgagcgcgtgctggtcaccgtgctcaccaagcgcatggcc
gaggacctgaccgactatttggccgacaacggcatccgcgtgcgctacctgcactcggac
atcgacaccgtcgagcgggtggagatcatccgcgacctgcgcctgggcgagttcgacgtg
ctggtgggcatcaacctgctgcgcgagggcctggacattcccgaggtgtcgctggtggcg
atcctggatgcggacaaggagggcttcctgcgctcggagcgttcgctgatccagaccatc
ggccgcgccgcgcgccacctgcacggcactgccatcctctacgccgaccgcatcaccgat
tcgatgaaggcggcgatcggcgagaccgagcgccgccgccagaagcagatcgccttcaac
gaggccaacggcatcgtgccgaagtcggtgacgaagcgcatcaaggacatcatcgacggg
gtctatgatgcggatggggccaggcgcgacgtggcgcgcgtggccgagaagggcgccgac
tatgcggtgatggacgagaaggcgctggcgcgggcgatcaagcgcctggaaaaggagatg
caggaacacgcccgcaatctggagttcgaaaaggccgctgcagcgcgcgacgagttgttc
aagcttcgtcagcgcgcgtttggcgcagaccagcacggcagtgtctga
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