Thauera sp. GDN1: CKCBHOJB_01879
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Entry
CKCBHOJB_01879 CDS
T09925
Name
(GenBank) putative TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
thag
Thauera sp. GDN1
Brite
KEGG Orthology (KO) [BR:
thag00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
thag02000
]
CKCBHOJB_01879
Transporters [BR:
thag02000
]
Other transporters
Pores ion channels [TC:
1
]
CKCBHOJB_01879
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
DUF6850
Motif
Other DBs
NCBI-ProteinID:
WEN42292
LinkDB
All DBs
Position
complement(2056169..2058223)
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AA seq
684 aa
AA seq
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MSRLQTTPTPLMLSLALAFGPAVAYADDTALAPVTVSASALALGSDQMSTPVSVLAGDEL
VRRRAATLGETLAGEPGIAASHFGAGASRPIIRGMDGPRVKLLSDGSEIMDASTISPDHA
VALEPILSEQIEVLRGPSALAYGGGAIGGVVNVLDKRVPTAVPERGVEGSVELRADSVAN
GVAGAFEVTAGSGNLAFHAEGLKRDARDYRVGSGWDHSRVDGSHNQTETSSLGVSWVGAR
GYLGLAYTRQQNEYGLPGHSDEYEACHPDGDRLHCGLHGEEDGHEHEHDEHGATPYVKLD
SERWDLRGELLEPFAGFTRARLRASYTDYGHDEIEQDEGIDSVGTRFRSKASDARVELEH
APLGGWRGVMGLQTGRRDFHADGDEAYVPPTVTIKHAAFVIEEYTLADWRFEAGLRHEWQ
DIEVDSSTQRDRNHHGNSVSLGAVWDFAPQYSLGMTLSRTRRLPTAEELYARGLHMATST
WERGTPELKAETANNVDLTLRKLAGPTTFSVSVFHNRIDDYIHARTLDAYEDFQLIEYAQ
RDASFTGIEGAIRQQLDATFGLTLFGDYVRAKLEAGDGDRDLPRIPAHRVGLRLDAKWNA
WRAEAEVYRVGRQDDIAEFELETPGYNMVSVGLSYGGLYKGTPWQLYVKGNNLGNQLAYA
HTSFIKNAAPLDGRNLTVGVKLAF
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atgtccaggcttcaaaccacccccaccccgctcatgctgagcctcgccctcgctttcggg
cccgccgtcgcgtacgcggacgacaccgcgcttgccccggtcacggtctcggccagcgcg
ctcgcgctcggcagcgatcagatgagcaccccggtcagcgtgctcgccggcgacgaactc
gtgcgccgtcgtgccgccacgctcggcgagacgctggccggcgaacccggcatcgccgcc
agccacttcggcgctggcgccagccggcccatcatccgcggcatggatggtccgcgcgtc
aagctgctgtcggacggcagcgagatcatggacgcatccacgatcagccccgaccacgca
gtggcgctcgaaccgatactgagcgaacagatcgaggtgctgcgcggcccgtccgcgctg
gcctatggcggcggcgcgatcggcggcgtggtgaatgtgctcgacaagcgcgtccccacc
gcggtccccgaacgcggggtcgaaggcagcgtggaactgcgcgccgacagtgtcgcgaat
ggcgtcgccggcgcgttcgaagtcaccgcgggcagcggcaacctcgccttccacgccgaa
gggctcaagcgcgacgcgcgcgactaccgtgtcggcagcggctgggaccacagccgggtc
gacggcagccacaaccagaccgagaccagcagcctcggcgtgtcatgggtgggcgcacgc
ggctatctcggcctcgcctatacccgtcaacagaacgagtacgggctacccgggcacagc
gatgaatacgaggcctgccacccggacggcgaccgtctgcattgcggcctccacggcgag
gaagacgggcacgagcatgaacacgacgaacacggcgccaccccgtacgtgaagctcgac
agcgaacgctgggacctgcgcggcgaactgctggagcccttcgccggcttcacccgcgcc
cgcctgcgcgcgtcctacaccgattacggccacgacgagatcgagcaggacgaagggatc
gacagcgtcggcacccggttccgcagcaaggccagcgatgcccgcgtcgaactcgaacat
gcgccgctcggcggctggcgcggcgtgatgggcctgcagacgggccgccgcgacttccac
gccgatggcgacgaagcctatgtgccccccaccgtgacgatcaagcacgcggccttcgtg
atcgaggaatacaccctggccgactggcgcttcgaagccggcctgcgtcacgaatggcag
gacatcgaagttgacagcagcacccagcgcgaccgcaaccaccatggcaactccgtgtcg
ctgggcgcggtgtgggacttcgccccgcagtacagcctgggcatgacgctgtcccgcacc
cggcgcctgccgacggccgaggagctctatgcgcgcggcctgcacatggcgaccagcacc
tgggaacgcggcacccccgagctgaaggcggaaacggccaacaacgtcgacctgacgctg
cgcaagctcgccggtcccaccaccttctccgtcagcgtgttccacaaccgcatcgacgac
tacatccacgcccgcacgctcgacgcctacgaggacttccagctcatcgagtacgcccag
cgcgacgccagcttcaccggcatcgagggcgccatccgccagcagctcgacgccaccttc
ggcctgaccctgttcggcgactacgtgcgcgccaagctcgaggccggcgacggcgaccgc
gacctgccgcgcatcccggcacatcgcgtcggcctgcggctggatgccaaatggaacgcc
tggcgtgccgaggccgaggtctatcgcgtcggtcgccaggacgatatcgccgagttcgag
cttgagacgccaggctacaacatggtcagtgtcggcctgagctacggcggcctctacaag
ggcacgccctggcagctctacgtcaagggcaacaacctcggcaaccagctggcctacgcg
cacacctcgttcatcaagaacgctgcgccgctcgatggccgcaacctcacggtcggcgtg
aagctcgcgttctga
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