Thauera sp. GDN1: CKCBHOJB_01932
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Entry
CKCBHOJB_01932 CDS
T09925
Symbol
ycaO
Name
(GenBank) Ribosomal protein S12 methylthiotransferase accessory factor YcaO
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
thag
Thauera sp. GDN1
Brite
KEGG Orthology (KO) [BR:
thag00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
thag03009
]
CKCBHOJB_01932 (ycaO)
Ribosome biogenesis [BR:
thag03009
]
Prokaryotic type
ribosomal protein modification factors
CKCBHOJB_01932 (ycaO)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
YcaO_C
YcaO
OsmC
Sin3a_C
Motif
Other DBs
NCBI-ProteinID:
WEN42340
LinkDB
All DBs
Position
2109967..2112162
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AA seq
731 aa
AA seq
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MEIKVNFLDKLRLEAKFDDFTVIADQPIRYKGDGSAPGPFDYFLASSALCAAYFVKLYCE
TRDIPTDNIRLSQNNIVDPENRYKQIFKIQIELPEDISAKDRQGILRSVERCTVKKVVQT
GPEFVIEEVENLDADAQALLTLNPDPDAHTYILGKDLPLEQTIANMSKVLADLGIKIEIA
SWRNLVPNVWSLHIRDAHSPMCFTNGKGASKESALASALGEYIERLNFNHFYNDQFWGED
IANAPFVHYPNERWFKPGPGDALPAGILDEYCLEIYDPDGELRGSHLYDTNSGNIERGIC
ALPYVRQSDGEVVYFPTNLTDNLFLSNGMSAGNTLAETQVQCLSEIFERAVKREIIEGEI
ALPDVPQEVLAKYPGIVAGIEGLESQGFPVLVKDASLGGVYPVMCVTLMNPRTGGVFASF
GAHPSMEVALERSLTELLQGRSFEGLNDLPPPTFETAVVTDPHNYVEHFIDSSGVVSWRF
FSARADHDFVEWDFSGHGENSNADEAATLFGILADMGKEVYMAVHDQLGAIACRILVPGY
SEVYPVEDLIWDNTNKALGFREDILNLHRLDDEGLEALLERLEESELDDYTDIITLIGIE
FDENTVWGQLTILELKLLINLALQQFEEAKERVEAFLQYNENTVDRVLFYQALNVVLEVV
LDEELELDDYEANLRRMFGNERMDAVLGSVDGSVRFHGLTPTSIKLEGLDRHQRLIDSYR
KLHRARASVAA
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atggaaatcaaggtcaattttctcgacaagcttcgtctcgaagccaagttcgacgacttc
acggtcatcgccgatcagcccatccgctacaagggcgacggctcggcgccggggccgttc
gattacttcctggcttcgtcggccttgtgcgcggcctacttcgtgaagctgtactgcgaa
acgcgcgacattcccaccgacaacatccggctgtcgcagaacaacatcgtcgatccggag
aaccgctacaagcagatcttcaagattcagatcgagctaccggaggatatctccgccaag
gaccgccagggcatcctgcgctccgtcgagcggtgcacggtcaagaaggtcgtgcagacg
gggcccgagttcgtgatcgaggaagtggagaacctggacgccgatgcccaggccttgctg
acgctgaatccggatccggacgcccacacctacatcctcggcaaggatctgccgctggaa
cagacgatcgccaacatgtcgaaggtgctggcggaccttggcatcaagatcgagatcgcg
tcgtggcgaaatctcgttcccaacgtgtggtcgctgcatatccgcgatgcgcattcgccg
atgtgcttcaccaatggcaagggcgcgagcaaggaaagcgccctggcgtcggcattgggc
gaatacatcgagcgtctgaacttcaaccatttctacaacgaccagttctggggcgaggac
atcgccaacgcgcccttcgtgcattacccgaacgagcgctggttcaagcccggcccggga
gatgcgctgccggccggaattctcgacgagtactgcctggagatctacgaccccgatggc
gagttgcgcggctcgcacttgtacgacaccaactccggcaatatcgaacgtggcatctgc
gcgctgccctatgtgcgccagtccgacggcgaggtggtgtatttccccaccaacctcacc
gacaacctgttcctcagcaacggcatgagtgccggcaatacgctggcggaaacacaggtg
caatgcctttcggagatcttcgagcgcgcggtgaagcgcgaaatcatcgaaggtgaaatc
gcgctgccagacgtgccgcaggaagtgctggcgaagtatccgggcatcgtggccggcatc
gaagggctggaaagtcagggtttcccggtactggtgaaggatgcgtcgctgggcggggtg
tatccggtgatgtgtgtcaccctgatgaacccgcgcacgggcggcgtgttcgcctccttc
ggcgcccaccccagcatggaggtggcgctggagcgcagcctgaccgaattgctgcagggg
cgcagcttcgagggcctgaacgacctgccgccgcccaccttcgagacggcggtcgtcacc
gacccgcacaactacgtcgagcacttcatcgattccagcggcgtggtgtcgtggcgcttc
ttcagcgccagggccgatcacgatttcgtcgagtgggatttctccggtcacggcgagaat
tccaacgccgacgaggccgcgaccctgttcggcatcctcgcggacatgggcaaggaggtg
tacatggcggtgcatgaccagctcggcgcaatcgcctgccgcatcctggtcccgggctat
tccgaggtctatccggtggaggacctgatctgggacaacaccaacaaggcgctcggcttc
cgcgaagacatcctgaacctgcaccgcctcgacgacgagggcctggaagcgctgctcgaa
cgcctggaagagagcgagctcgacgattacacggacatcatcaccctgatcggcatcgag
ttcgacgagaatacggtgtgggggcagctgacgattctggagttgaagctgctgatcaac
ctcgctctgcagcagttcgaagaggcgaaggagcgcgtcgaagccttcctccagtacaac
gagaacacggtcgatcgcgtgctgttctatcaggccctgaacgtggtgcttgaggtggtg
ctggacgaggaactcgaactggacgactacgaggccaatctccgccgcatgttcggcaac
gagcggatggacgcggtgctggggtcggtggatggcagcgtgcgcttccacgggctgacg
ccgaccagcatcaagctggaagggctcgaccggcaccagcgcctgatcgacagctacagg
aagctgcaccgggcgcgggcgagcgtggcggcctga
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