Thauera sp. GDN1: CKCBHOJB_02242
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Entry
CKCBHOJB_02242 CDS
T09925
Symbol
rhsC
Name
(GenBank) Protein RhsC
Organism
thag
Thauera sp. GDN1
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
DUF6531
T6SS_Tle1-like_cat
RHS
DUF7379
OCRE
Motif
Other DBs
NCBI-ProteinID:
WEN42643
LinkDB
All DBs
Position
2440168..2445414
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AA seq
1748 aa
AA seq
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MTSSRQPIRSMLIRVLLGLLLMTPAAAIAQFSAGGGQSPPQSTLSQSDCLAGDGGDPGAN
PCAGAGPASQEDDSGVEHGAGNPIDVLTGNKYQRETDLPALPGVLGIEIVRHYNSAQAGT
DAPLGLLGRGWRLSYETDLYALEHELHIVQADGRRHVFTRDPKAQDRYTSADPARGWVTS
TASASLEGRMRYRWTWPDGRTLDFDARGKLVQIRVPSGEFLSLTRGPRGELMKVTDPQGR
SLSFEYAPRDRAGFRGVVAITSPLGRFSYAHQNDHGRPGLSNLVGVTHPDGGLRRYHYGA
DDGEGAPAWPHHLTGVSLVDAAPDGRPEHAPQQERLSTYAYDHQGRAVMSVRGAPRRVDG
SGKTLPGTGIEQVDLDFPTPGRTVLTNALGQRTTYRHALVGGQPRLLEIIGPGCASCGET
RLRYAYDTLGRTIAITRLDLAAKALATTTIERDAAGRVQRESLRRHADGKPSPVRQIVRY
EYAGDSPRPALVARPSVVPGREVQRRYTYNEAGQLARITETGFSPLDASGEPIGSASDAT
PIERSTTFTYTRINGRSLLAAIDGPLPNGPQASPLDSDITTLEWDGQGNHPVAVTQPGGR
RSTLEHATATGLLQAVTNHEGYATRFSYDLHQRVVTVRSHGPGGTRQQERQIRYDALGRP
VESLDPARPASNWLRAWDERGRLLWHASALGVLDRFSYDNEGRLIEHGRRSASFDRTHWR
RYDHEGRVEAVLDNAGRGRQWHRDTHGRLQYAVDADGLVHPGPAALAPRTRSQPLPPAPR
TLHDDFGRAVWKQDADRGAEVREYNAGDRLIAMQDARGNRARYEYDVRGRIHRQSITDAR
SGTVEETRWHYTGDRLSEILHPTQRERYEYDANGFRSARIVTLPTAQGELTTVTRYEHDD
SGRLIATTLPDGSRLRYERNGQGQVVALKRETAGTPWLPWMSSDRLIAGEFERDLAGLRG
YVSGNGIQTLLQRSPEGVLARIVHRHHRPETSRSASRSLLEHRYVWDGRGNLLHSRQHAT
GGGAQPGLTSHAYDRGNRLLASVRWRTRSDTVAEQSVWRFAYDPAQRRVLAQQDVASQDE
LHAGTRRAAFEPGSHRQSPTADRLVRHDAGGQPERIGEREYTWDARGRLVEVRVRGATLA
RYGYDHRGLRNTRQTAGGTIHTIYDEHRQPLAELDTNGRILRQYIWLADLPLAVIDTPQG
IAPAKADSTPMSDFMNEIGKLLRASFTEDEAIAWLHANHLGAPELATGADGRVLWRATYA
PFGAAKIESQGFTLNLRLPGQHFDPETGLHYNRARYYDPELGQYLTPDPLGTPDGPNPYA
YVAFNPLRYVDPDGLVLFAFDGTGNSDDRNDPAMAGSGFSNVVNFLRAYEDGNRRYVSGV
GTVHRDIEYGDIRPEDYASRTLLWWLTPGDPTYINDMGGNYSGPARIARMMLYLRDEADQ
LEDDEVLDIDIIGFSRGGAQARDFANRIVADAADYEGATYYSYTKKDGTPGCQPVNFRFM
GLFDTVLSTNMSGTGYRLGIPDNFTYVAQAIALNEHRSDSLQEFGYRNPKPHSMHWGGFP
LESIGASSDEPGQIRVEKGFIGAHADIGGGYPDDEQGLSLVALNWMVEQARLAGVSMKSI
DPIPAHEVVLHDQSNVIQAGNPQNVVPRQMTQGDLPWIDYVFPEDRSVNGAIAGDRQRNM
GFDNGSLTHADTHQFITWRARDIDQLGTGSTLDPRELDNVTGTVDMRQYVKWLCANAYFD
KNAPQCAS
NT seq
5247 nt
NT seq
+upstream
nt +downstream
nt
atgacctcgtcccggcaacccatccgcagcatgctgatccgcgtcctccttggcctgctg
ctcatgacccccgcagccgcgatcgcgcagttctcggctggcggagggcaatccccgcct
caatccacgctatcgcaaagcgattgccttgccggcgatggcggcgatccgggcgcaaac
ccgtgcgcaggcgccggaccggcgagccaggaggacgacagcggtgtcgagcacggcgcg
ggcaatccgatcgacgtcctcaccggcaacaagtaccagcgcgagaccgaccttcccgcc
ctgcccggcgtgctgggcatcgagatcgtgcgccactacaacagcgcacaggcgggtacc
gacgcgccgctcggcctgctcgggcgcggctggcggctgtcctacgagacggatctgtac
gcactcgagcacgagctgcacatcgtgcaggcggatggccgacgccacgtcttcacccgg
gaccccaaggcgcaggaccgctacacgagtgccgacccggcgcgcggctgggtcacgagc
acggcctccgcatcccttgaaggacggatgcgctaccggtggacctggcctgacggacgc
acgctcgacttcgatgcgcgcggaaaactcgtgcagatccgggtacccagcggcgaattc
ctcagcctcacgcgcggcccgcgtggcgagctgatgaaggtcaccgacccgcaggggcgc
agcctcagcttcgagtacgcgccccgcgaccgcgcaggtttccgcggtgtcgtcgcgatc
accagtccgctcgggcgtttcagctatgcgcaccagaacgaccacggccgacccggattg
agcaacctcgtcggcgtcacgcatccggacggaggcctgcggcgctaccactatggcgcc
gacgacggcgaaggggcgccggcctggccccaccacctcaccggtgtcagcctggtcgac
gcagcgccggacggtcggccagaacacgcgccgcagcaagagcgcctgtcgacctacgcc
tacgaccaccagggacgcgccgtcatgagtgtgcgcggggcgccgcggcgcgtggacgga
tccggcaagacgctacccggcaccggcatcgagcaggtggatctggacttcccgaccccg
ggccgcaccgtgctcaccaacgccctgggccagcgcaccacctaccgccatgccctcgtc
ggcggccaaccgcgcctgctggagatcatcggtcccggctgtgccagctgcggtgaaacc
aggctgcgctacgcctacgacacgctcggccgcacgatcgcgatcacccgtctcgacctc
gccgccaaggcgctcgccaccaccacgatcgaacgcgacgcagccggccgcgtgcagcgc
gagtccctccgccgccatgccgacggcaagccctcgccggtgcgccagatcgttcgctac
gagtacgccggcgatagcccgcgacctgcgctcgtcgcacgcccaagcgtcgtgcccggg
cgcgaagttcagcgccgttacacctacaacgaggccgggcagctcgcccgcatcaccgag
accggcttcagcccgctcgacgcctcgggcgagccgatcgggagcgccagcgatgccacc
ccgatcgaacgctcgaccaccttcacctacacccggatcaatgggcgctcgctgctggcc
gcgatcgatggcccgctaccgaacgggccgcaggcatcgccgctcgactccgacatcacg
accctggaatgggacgggcaaggaaaccacccggtggcggtcacgcagcccggcgggcgg
cggagcacgctcgagcacgcgacggcaaccggactgctgcaggcggtaacgaaccacgag
gggtacgcgacccgcttttcgtacgacctgcaccaacgcgtcgtcaccgtgcgcagccac
ggcccgggtgggacaaggcagcaggaacggcagatccgctacgacgccctgggacgtccg
gtcgagtcactggacccggcgcgtccggcgtcgaactggctgcgtgcatgggacgagcgc
ggtcgcctgctctggcacgcgagcgcgctgggcgtcctcgaccgcttctcctacgacaac
gaggggcgcctgatcgagcacggccggcgcagcgccagcttcgaccggacgcactggcgc
cgttacgatcatgagggccgggtcgaagccgtgctggacaacgccgggcgcggccggcaa
tggcatcgcgacacccacggacggctgcagtacgctgtcgatgccgacggactcgtccat
cccggccctgcagcccttgcgccgcggaccaggagtcagccgctgccccccgcgccccgg
acgcttcacgacgacttcggacgtgccgtgtggaagcaggacgccgaccgcggtgccgaa
gtgcgcgaatacaatgccggcgaccggctcatcgcgatgcaggatgcgcgcggcaaccgc
gcccgatacgagtacgacgtccgcgggcgcatccaccgccagtcgatcaccgacgcccgc
agcggtaccgtcgaggaaacccgctggcactacaccggcgaccgtctgagcgagatcctt
catcccacccagcgcgaacgctacgaatacgatgcgaacggatttcgcagcgcacgcatc
gtcaccctgcccactgcacagggcgagctgacgacggtcacccgctacgaacacgacgac
tcgggccggctgatcgcaaccacgctgcccgacggcagccgcctgcgctacgagcgcaac
ggccagggccaggtcgtcgcgttgaaacgcgaaacggcgggcacgccctggctgccctgg
atgagctccgatcggctcatcgccggcgagttcgagcgcgacctcgccggcctgcgcggc
tacgtgagcggcaacggcatccagaccctgttgcagcgcagtcccgaaggcgtgctcgcg
cgcatcgtgcatcgccaccaccgccccgaaaccagccgatccgcaagtaggtcactgctc
gaacaccgctacgtctgggacggacgcggcaacctcctgcacagccgccagcacgcaact
ggcggtggcgcccaacccggcctcaccagccacgcctacgaccgtggtaaccgcctgctc
gcctccgtccggtggcggacgcggagcgacaccgtggccgagcagtcggtgtggcgcttc
gcctacgatcctgcccagcgccgtgttctggcgcagcaggatgtcgcttcgcaggatgaa
ctgcacgccggaacccggcgagccgcgttcgagcccggctcccaccgtcagtcgcccacg
gccgaccgcctcgttcgtcacgacgccggcggccagcccgagcggatcggcgagcgggaa
tacacctgggacgcacgcggccgcctcgtcgaggtgcgcgtgcgcggcgcgacgctggcc
cgctacggctacgaccaccgcggcctgcgcaacacccggcaaacagctggcggaacgatc
cacaccatctacgacgagcaccgccagcctctggccgaactcgacacgaacggacgcatc
ctgcgccagtacatctggctggccgacctgccgctggccgtcatcgacaccccgcagggc
atcgccccggccaaggccgattccacccccatgtcggacttcatgaacgagatcggaaaa
ctgctgcgcgcgagtttcaccgaagacgaagccattgcctggctgcacgccaaccacctc
ggcgccccggagctcgccaccggcgcggacggccgggtcctgtggcgggcgacctacgcc
cccttcggcgccgccaagatcgagagccagggattcacgctcaacctgcgcctgcccggc
cagcacttcgacccggagaccgggctgcactacaaccgcgcgcgctactacgaccccgaa
ctgggccagtacctcactcccgaccccctcggcacgcccgacgggccgaatccttacgca
tacgtcgcattcaaccccctgcgctacgtcgatccggatgggctggtgctgttcgcgttc
gatggcacggggaacagcgatgaccgcaacgatcccgcgatggcgggcagtggcttcagc
aacgtggttaacttcctgcgcgcctacgaggatggaaatcgacgttacgtgagcggggtc
ggcacggtgcatcgcgacatcgagtacggcgacatccgccccgaagactacgcgagccgc
accctgctgtggtggctcacgcccggcgacccgacctacatcaacgacatgggtggcaac
tattccgggccggcacgcatcgcccgcatgatgctgtacctgcgcgacgaagcggaccag
ctcgaagacgacgaggtcctggacatcgacatcatcggcttcagccgcggcggcgcgcag
gcgcgcgatttcgccaaccgcatcgtcgcggatgcggcggactacgagggcgcgacctac
tacagctacacgaagaaggacggcacgcccggttgccagccggtcaacttccgcttcatg
ggtctgttcgacacggtgctatcgaccaacatgagcggaacgggctacaggctcggcatt
ccggacaacttcacgtatgtcgcccaggccatcgcactcaatgagcatcgatccgactct
ttgcaggagttcgggtatcgcaacccgaaaccgcacagcatgcactggggcggattcccg
ctggagtccatcggcgccagcagcgacgaaccggggcagatccgcgtcgagaagggcttc
atcggggcgcacgcggacatcggcgggggctatccggacgatgagcagggactttctctc
gtcgcgctgaactggatggtcgagcaggcacgcctggcgggtgtaagtatgaaaagtatc
gatccgatccccgcccacgaagtggtgctgcacgaccagagcaacgtgattcaggcgggc
aatccgcagaatgtggtcccccgccagatgacccagggcgacctgccctggatcgactat
gtctttcccgaggaccgcagcgtcaatggcgccatcgccggggatcgtcagcgcaacatg
ggcttcgacaacggcagcttgacgcacgccgacacccaccagttcatcacctggcgagcg
cgcgatatcgaccagctcggcactggctcaaccctcgaccctcgcgaactcgacaacgtc
accggcacggtcgacatgcggcaatatgtgaaatggttgtgcgcgaacgcctatttcgac
aagaacgctcctcaatgtgcttcgtga
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integrated database retrieval system