Thauera sp. GDN1: CKCBHOJB_02743
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Entry
CKCBHOJB_02743 CDS
T09925
Name
(GenBank) hypothetical protein
KO
K01999
branched-chain amino acid transport system substrate-binding protein
Organism
thag
Thauera sp. GDN1
Pathway
thag02010
ABC transporters
thag02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
thag00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
CKCBHOJB_02743
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CKCBHOJB_02743
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
thag02000
]
CKCBHOJB_02743
Transporters [BR:
thag02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
CKCBHOJB_02743
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_6
Peripla_BP_5
FadR_C
Motif
Other DBs
NCBI-ProteinID:
WEN43134
LinkDB
All DBs
Position
complement(3002992..3004206)
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AA seq
404 aa
AA seq
DB search
MQTKKLTTLACAAAFAMLSGAASAQISGNTVKVGVLTDMSGTYSDLAGAGAVLATQMAIE
DFIAEAKPAFKVEMVSADHQNKADIASNKAREWFEREGVDVATELVTTSTALAVMKVAKE
MNRITLMSGPGSTPITNEQCNDLSVHYTYDTYALANGTAKAVTQQGGDTWYFLTADYAFG
QALERDSSAVVTANGGKVLGSVRHPFPASDFSSFLLQAQASGAKIIGLANAGADTTNAIK
QAAEFGVTPKQSLAGLLMFISDVHSLGLQSTQGMYLTTGFYWDLNDETRAWSKRFFDKHK
RMPTMVQAGQYSSVMHYLRAVKAAGTDDSGKVMAQMKTTPINDFFAKNGRIRDDGRMIHD
MYLAQVKKPDESKYPWDYYHIRQTIPADEAFLPLAQSKCPLVKK
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atgcagacgaagaaactcaccaccctggcctgtgctgccgcctttgcgatgctgtcgggt
gcggcgagcgcgcagatctcgggcaacacggtcaaggtcggcgtgctcaccgacatgtcg
ggcacctattccgacctcgccggcgccggcgcggtgctcgccacccagatggcgatcgag
gacttcatcgccgaggccaagcccgcgttcaaggtcgagatggtgtccgccgaccaccag
aacaaggccgacatcgcctccaacaaggcgcgcgagtggttcgagcgcgagggcgtggac
gtcgccaccgagctggtgaccacctccaccgcgctcgcggtcatgaaggtcgccaaggag
atgaaccgcatcaccctgatgagcggcccgggctccacgccgatcaccaacgagcagtgc
aacgacctctcggtgcactacacctacgacacctatgcgctcgccaacggcaccgccaag
gcggtgacccagcagggcggcgacacctggtacttcctgaccgccgactacgccttcggc
caggcgctggagcgggattcttccgcggtggtcacggccaacggcggcaaggtgctgggc
tcggtgcgccatcccttcccggcatcggacttctcgtccttcctgctccaggcccaggcc
tcgggcgccaagatcatcggcctggccaacgccggcgccgacaccaccaacgcgatcaag
caggcggccgagttcggcgtcacccccaagcagtcgctcgccggcctgctgatgttcatc
tccgacgtgcattcgctcggcctgcagagtacccagggcatgtacctgaccaccggcttc
tactgggacctcaacgacgagacccgcgcctggtcgaagcgcttcttcgacaagcacaag
cgcatgccgaccatggtccaggcggggcagtactcgtcggtgatgcactacctgcgcgcg
gtgaaggccgccggcaccgacgattcgggcaaggtcatggcgcagatgaagaccacgccg
atcaacgacttcttcgccaagaacggccgcatccgcgacgacggccgcatgatccacgac
atgtacctcgcccaggtcaagaagccggacgagtccaagtacccgtgggactactaccac
atccgccagaccatcccggcggacgaggccttcctgccgctggcgcagtcgaagtgcccg
ctggtcaagaagtaa
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