Thauera sp. GDN1: CKCBHOJB_03183
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Entry
CKCBHOJB_03183 CDS
T09925
Symbol
cdhR_3
Name
(GenBank) HTH-type transcriptional regulator CdhR
KO
K04033
AraC family transcriptional regulator, ethanolamine operon transcriptional activator
Organism
thag
Thauera sp. GDN1
Brite
KEGG Orthology (KO) [BR:
thag00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
thag03000
]
CKCBHOJB_03183 (cdhR_3)
Transcription factors [BR:
thag03000
]
Prokaryotic type
Helix-turn-helix
AraC family
CKCBHOJB_03183 (cdhR_3)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_18
HTH_AraC
HTH_7
HTH_11
XopL_C
Motif
Other DBs
NCBI-ProteinID:
WEN43559
LinkDB
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Position
3466682..3467668
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AA seq
328 aa
AA seq
DB search
MSPAAQPSVRAPYSYTLRDTLDADDHAACLTNWQQRYDQLTAGAFAGVFEEFCFGKVQLF
REGLNQSVHQAGGAWRGSRTFAVPIAIEGTGWFGGEVYDAQSMLTLGGDDELDFRTPRRL
EILACTADSAALHDYAQQVDHRNLEAELAGRKLAPATPEGMTALGQLLATMMASLRATPE
LLLHPQMRKAMEQALFATLLDTLSVGSGQAAPAPSCRARQLVVARARAYMEAHIDEPITV
ADLCIELGVSRRTLQYSFQDVLDLNPVRFLRAIRLNAVRRALKAADPSGRSTVADIAARW
GFWHLSHFSAEYKTMFGELPSDTLRRAG
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgagcccggctgcccagccttcggttcgcgccccctactcctacaccttgcgcgacacg
ctcgacgccgatgatcacgcggcctgcctgaccaactggcagcagcgctacgaccagctg
acggcgggcgctttcgccggcgtgttcgaggagttctgcttcggcaaggtgcagctcttt
cgcgagggcctgaaccagtcggtgcatcaggctggcggcgcgtggcgcggctcacgcacc
ttcgccgtgccgatcgcgatcgaaggcacgggctggttcggcggcgaggtctatgacgcg
cagtccatgctgaccctcgggggcgacgacgagctcgatttccgcaccccgcgccggctc
gagatcctcgcctgtaccgccgattcggcggcgctccacgactatgcgcagcaggtggac
caccgcaacctcgaggccgagctcgccgggcgcaagctggcgcccgccacgcccgaggga
atgacagcgctcggccaactgctggcgaccatgatggccagcctgcgtgcgacccccgaa
ctgctgctccacccgcagatgcgcaaggccatggagcaggccttgttcgccaccctgctc
gacacgctgtcggtcggcagcggacaggcggcaccggccccgtcctgtcgcgcccgccag
ctcgtggtggcgcgcgcacgtgcctacatggaggcccacatcgacgagccgatcacggtc
gccgacctgtgcatcgagctcggcgtgtcgcgccgcaccctgcagtacagcttccaggac
gtgctcgatctcaacccggtgaggttcctgcgcgccatccgcctgaatgcggtgcgccgc
gcgctcaaggccgccgaccccagcggccgcagcacggtcgccgacatcgccgcgcgctgg
ggcttctggcacctgtcgcacttttccgccgagtacaagacgatgttcggcgaactaccg
tcggacacgctcaggcgtgccggctga
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