Thauera sp. GDN1: CKCBHOJB_03442
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Entry
CKCBHOJB_03442 CDS
T09925
Symbol
ruvB
Name
(GenBank) Holliday junction ATP-dependent DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
thag
Thauera sp. GDN1
Pathway
thag03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
thag00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CKCBHOJB_03442 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
thag03400
]
CKCBHOJB_03442 (ruvB)
Enzymes [BR:
thag01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CKCBHOJB_03442 (ruvB)
DNA repair and recombination proteins [BR:
thag03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CKCBHOJB_03442 (ruvB)
RecFOR pathway proteins
CKCBHOJB_03442 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
AAA_16
Mg_chelatase
TIP49
AAA_22
AAA_3
nSTAND3
Rad17
AAA_14
AAA_18
AAA_2
DUF815
TsaE
TniB
NTPase_1
AAA_33
AAA_17
AAA_28
RNA_helicase
AAA_24
IstB_IS21
AAA_25
bpMoxR
NB-ARC
ABC_tran
Zeta_toxin
Motif
Other DBs
NCBI-ProteinID:
WEN43812
LinkDB
All DBs
Position
3728953..3730008
Genome browser
AA seq
351 aa
AA seq
DB search
MIETDKLRAAPAERLISAAPADRQEDAIERALRPKRLAEYVGQAKIREQLEIFIQAARRR
SEALDHVLLFGPPGLGKTTLAHIVAAEMGVNLRQTSGPVLERAGDLAALLTNLEPHDVLF
IDEIHRLSPVVEEILYPALEDYQIDIMIGEGPAARSVKLDLPPFTLVGATTRAGMLTNPL
RDRFGIVSRLEFYTPEELGFIVGRSARLLNVEIDDNGALEIARRARGTPRIANRLLRRVR
DYAEVRAGGHITAAVADAALKMLDVDTLGLDLMDRKLLSAMLEKFGGGPVGLDNIAAAIG
ESTDTIEDVIEPYLIQQGYLQRTPRGRMATHSIWQHFGLAPPRSGGDLFEA
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atgatcgaaaccgacaagctgcgcgccgcccccgccgagcgcctgatctccgccgcaccg
gccgatcgccaggaagacgcgatcgagcgcgcgctgcgccccaagcgcctggccgaatac
gtgggccaggccaagatccgcgagcagctggagatcttcatccaggccgcgcgccggcgc
agcgaggcgctggaccacgtgctgctgttcggcccgccggggctgggcaagaccacgctc
gcccacatcgtcgccgccgagatgggggtgaacctgcgccagacctcgggcccggtgctc
gagcgcgccggcgacctcgccgcgctgctgaccaacctcgaaccgcacgacgtgctgttc
atcgacgagatccaccgcctgtcgccggtggtcgaggaaatcctctacccggcgctggag
gactaccagatcgacatcatgatcggcgaaggcccggcagcgcgctcggtcaagctcgac
ctgccgccgttcacgctggtcggcgccaccacccgcgccggcatgctgaccaacccgctg
cgcgaccgcttcggcatcgtgtcgcggctggagttctacaccccggaagagctcggcttc
atcgtcgggcgctcggcgcgcctgctcaacgtcgagatcgacgacaacggcgcgctcgag
atcgcccgccgcgcacgcggcacgccgcgcatcgccaaccgcctgctgcgccgggtgcgc
gactatgccgaggtcagggccggcggccacatcaccgcggcggtggcggatgcagcactg
aagatgctcgatgtcgacacgctcgggctcgacctgatggaccgcaagctgctgtcggcg
atgctggagaagttcggcggcggcccggtcgggctggacaacatcgccgcggcgatcggc
gaatccaccgacaccatcgaggacgtcatcgagccctacctgatccagcagggctacctg
cagcgcacgccgcgcgggcgcatggccacgcactcgatctggcagcacttcggactggcg
ccaccgcgcagcggcggcgatctgttcgaggcctga
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