Thauera sp. GDN1: CKCBHOJB_03582
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Entry
CKCBHOJB_03582 CDS
T09925
Symbol
rsmB_2
Name
(GenBank) Ribosomal RNA small subunit methyltransferase B
KO
K03500
16S rRNA (cytosine967-C5)-methyltransferase [EC:
2.1.1.176
]
Organism
thag
Thauera sp. GDN1
Brite
KEGG Orthology (KO) [BR:
thag00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
thag03009
]
CKCBHOJB_03582 (rsmB_2)
Enzymes [BR:
thag01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.176 16S rRNA (cytosine967-C5)-methyltransferase
CKCBHOJB_03582 (rsmB_2)
Ribosome biogenesis [BR:
thag03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
CKCBHOJB_03582 (rsmB_2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
RsmF-B_ferredox
NusB
FtsJ
Methyltransf_25
Methyltr_RsmF_N
Motif
Other DBs
NCBI-ProteinID:
WEN43950
LinkDB
All DBs
Position
complement(3862543..3863937)
Genome browser
AA seq
464 aa
AA seq
DB search
MPTPISLTVTFPPRSERRPPRASHGRPGHARPAPQRPASLAPDSLAQSFAWAAELVAGVL
EGGNLTDAYERMQAAHPEWPEATRGAVRDLAWTTLREFRHGSVVLDHLLQTSPATLIHAL
LLVALARLRQRPEQSHTVVDQAVQAAAALMPGLKNLVNGVLRNALRQRAQWPAWVELDPE
ARHGFPAWWIQRVKTAHPAAWEAALAAGNERPPMAVRVNPRRASIEQAQAELEAVGSACR
RLANDALLLERALPVARLPGYAEGRVSVQDAGAQWAARLLDPQAGERVLDACAAPGGKTA
HLLERADVELLALELDPVRARRVEHNLARLGLHAEVKVADCRERARWWDGRPFDRILADV
PCSASGVVRRHPDIKWLRRDTDIVQFAAQQAQILEALWHTLAPGGTMLYVTCSVFDEENA
GQIARFCARHADALRLPIEGRPDLQLLPDAEHDGFYFALLRKQA
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
gtgccaacgcccatttccctcaccgtgaccttcccgccccgctccgaacgccgcccgccg
cgcgcctctcatggccgtccgggccacgcccgtcccgcgccgcaacggcccgccagcctc
gcgccggacagtctggcccagtccttcgcctgggccgccgagctcgttgccggcgtgctc
gaaggcggcaacctcaccgatgcctacgagcgcatgcaggccgcgcatccggagtggccg
gaagcgacgcgcggcgcggtccgcgatctcgcctggaccacgctgcgcgagttccgccac
ggcagtgtcgtgctcgaccacctgctgcagacctcgcccgcgaccctgatccatgcgctg
ctgctggtggcgctggcgcggctgcggcagcgtccggagcagtcgcataccgtggtcgac
caggcggtgcaggccgcggccgcgctgatgccggggctgaagaacctggtcaatggcgtg
ctgcgcaatgcgctgcgccagcgcgcgcagtggccggcgtgggtggaactcgatcccgag
gcgcgtcacggcttcccggcgtggtggatccagcgcgtgaagacggcgcatcctgccgct
tgggaagccgcgcttgcggccggcaacgagcgtccgccgatggccgtgcgcgtcaaccct
cgccgcgcttcgatcgagcaggcccaggccgagctcgaagcggtcggctccgcctgccgt
cggctggcgaacgatgcgctcctgctcgagcgtgcgctgccggtcgcccgcctgccgggc
tacgcggagggcagggtgtcggtgcaggacgccggggcgcagtgggcggcccgcctgctc
gatccgcaagcgggcgaacgcgtgctcgacgcctgcgcggcgccgggcggcaagaccgcg
catctgctcgagcgcgccgacgtcgaactgctcgcactcgagctcgatcccgtgcgcgcg
cgccgggtcgagcacaacctcgcccgtctcggcctgcacgccgaggtgaaggtggccgac
tgccgggagcgtgcgcgctggtgggacggtcgtcccttcgaccgcatcctggccgacgtg
ccgtgctcggcctcgggcgtggtgcgccgccatcccgacatcaagtggctgcggcgcgac
accgacatcgtgcagtttgccgcgcagcaggcgcaaatcctggaggcgctttggcacacg
ctggcgccgggtggcacaatgctttacgtcacgtgctcggtgttcgacgaggagaatgcc
gggcagatcgcccgcttctgcgctcgtcacgccgatgcactccgcctgccgatcgagggg
cgcccggatcttcaactgctgcccgatgccgaacatgacggcttttatttcgcgctgctt
cgcaagcaggcctga
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